Miyakogusa Predicted Gene
- Lj6g3v0933470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0933470.1 tr|Q8S5C2|Q8S5C2_SOYBN 4-coumarate:CoA ligase
isoenzyme 3 OS=Glycine max GN=Gm4CL-3 PE=2 SV=1,91.9,0,Acetyl-CoA
synthetase-like,NULL; no description,NULL; AMP-binding,AMP-dependent
synthetase/ligase; D,gene.g65322.t1.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70657 homologue to UniRef100_P31687 Cluster: 4-coumar... 1057 0.0
gnl|LJGI|TC76208 homologue to UniRef100_Q8S5C2 Cluster: 4-coumar... 502 e-141
gnl|LJGI|TC72583 homologue to UniRef100_P31687 Cluster: 4-coumar... 250 9e-66
gnl|LJGI|FS350112 similar to UniRef100_P31687 Cluster: 4-coumara... 174 4e-43
gnl|LJGI|TC62381 homologue to UniRef100_Q8W558 Cluster: 4-coumar... 74 1e-12
gnl|LJGI|TC59755 homologue to UniRef100_Q8W558 Cluster: 4-coumar... 68 7e-11
>gnl|LJGI|TC70657 homologue to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2;
n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 -
Glycine max (Soybean), partial (31%)
Length = 964
Score = 1057 bits (533), Expect = 0.0
Identities = 539/541 (99%)
Strand = Plus / Plus
Query: 90 gagaaatgctgagctcatggttcttgaccctgaaactggttgttctcttggctataatca 149
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gagaaatgctgagctcaaggttcttgaccctgaaactggttgttctcttggctataatca 148
Query: 150 acccggtgaaatttgcatccgaggccaacagatcatgaaaggatatttgaacgatgagaa 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 acccggtgaaatttgcatccgaggccaacagatcatgaaaggatatttgaacgatgagaa 208
Query: 210 ggccacagccacaacaatcgatgcggaaggttggcttcacaccggtgatgttggttacat 269
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggccacagccacaacaattgatgcggaaggttggcttcacaccggtgatgttggttacat 268
Query: 270 tgatgatgatgatgagattttcatagttgacagggtgaaggaactcatcaaattcaaagg 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgatgatgatgatgagattttcatagttgacagggtgaaggaactcatcaaattcaaagg 328
Query: 330 cttccaagtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcaga 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cttccaagtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcaga 388
Query: 390 tgcagctgtcgtcccacaaaaggatgctgctgctggtgaagttcccgttgcctttgttgt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgcagctgtcgtcccacaaaaggatgctgctgctggtgaagttcccgttgcctttgttgt 448
Query: 450 gagatcaaatgggtttgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gagatcaaatgggtttgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 508
Query: 510 ggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtctccatc 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtctccatc 568
Query: 570 aggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaagccata 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaagccata 628
Query: 630 g 630
|
Sbjct: 629 g 629
>gnl|LJGI|TC76208 homologue to UniRef100_Q8S5C2 Cluster: 4-coumarate:CoA ligase
isoenzyme 3; n=1; Glycine max|Rep: 4-coumarate:CoA
ligase isoenzyme 3 - Glycine max (Soybean), partial
(31%)
Length = 527
Score = 502 bits (253), Expect = e-141
Identities = 268/273 (98%)
Strand = Plus / Plus
Query: 1 atgactgaggcagggccggtgctgtccatgtccctaggatttgcaaagcaaccgttcccc 60
||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 255 atgacggaggcagggccggttctgtccatgtccttaggatttgcaaagcaaccgttcccc 314
Query: 61 acaaagtcaggttcatgtggtactgttgtgagaaatgctgagctcatggttcttgaccct 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 315 acaaagtcaggttcatgtggtactgttgtgagaaatgctgagctcaaggttcttgaccct 374
Query: 121 gaaactggttgttctcttggctataatcaacccggtgaaatttgcatccgaggccaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaaactggttgttctcttggctataatcaacccggtgaaatttgcatccgaggccaacag 434
Query: 181 atcatgaaaggatatttgaacgatgagaaggccacagccacaacaatcgatgcggaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 435 atcatgaaaggatatttgaacgatgagaaggccacagccacaacaattgatgcggaaggt 494
Query: 241 tggcttcacaccggtgatgttggttacattgat 273
|||||||||||||||||||||||||||||||||
Sbjct: 495 tggcttcacaccggtgatgttggttacattgat 527
>gnl|LJGI|TC72583 homologue to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2;
n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 -
Glycine max (Soybean), partial (16%)
Length = 1000
Score = 250 bits (126), Expect = 9e-66
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 505 caggtggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtct 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 caggtggtgttttataaaagactgcacaaggtttactttgttcatgcaattcccaagtct 700
Query: 565 ccatcaggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaag 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ccatcaggaaagatattgaggaaagacctcagagcaaagctagaaaatggaaatcagaag 760
Query: 625 ccatag 630
||||||
Sbjct: 761 ccatag 766
Score = 208 bits (105), Expect = 3e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 405 acaaaaggatgctgctgctggtgaagttcccgttgcctttgttgtgagatcaaatgggtt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acaaaaggatgctgctgctggtgaagttcccgttgcctttgttgtgagatcaaatgggtt 459
Query: 465 tgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 509
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgatctaactgaagaggctgtaaaggagttcatatccaaacaggt 504
Score = 135 bits (68), Expect = 4e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 337 gtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcagatgcagct 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gtgcccccagctgaactcgaaggccttctcgtaagccatccctcaattgcagatgcagct 166
Query: 397 gtcgtccc 404
||||||||
Sbjct: 167 gtcgtccc 174
>gnl|LJGI|FS350112 similar to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2;
n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 -
Glycine max (Soybean), partial (36%)
Length = 630
Score = 174 bits (88), Expect = 4e-43
Identities = 154/176 (87%)
Strand = Plus / Minus
Query: 160 atttgcatccgaggccaacagatcatgaaaggatatttgaacgatgagaaggccacagcc 219
||||||||||| |||||||| |||||||||||||| |||| |||||||||||||| ||
Sbjct: 207 atttgcatccgtggccaacaaatcatgaaaggatacctgaatgatgagaaggccactgca 148
Query: 220 acaacaatcgatgcggaaggttggcttcacaccggtgatgttggttacattgatgatgat 279
|||| || ||||| |||||||||||||||| ||||| ||||||| | |||||||||
Sbjct: 147 gcaactattgatgcacaaggttggcttcacactggtgacattggttatgtagatgatgat 88
Query: 280 gatgagattttcatagttgacagggtgaaggaactcatcaaattcaaaggcttcca 335
|||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 87 gatgagattttcattgttgatagggttaaggaactcatcaaattcaaaggtttcca 32
>gnl|LJGI|TC62381 homologue to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (59%)
Length = 1215
Score = 73.8 bits (37), Expect = 1e-12
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 235 gaaggttggcttcacaccggtgatgttggttacattgatgatgatgatgagattttcata 294
||||||||| | || || |||||| |||| ||||| || || ||||||||| | |||||
Sbjct: 567 gaaggttggttgcatacaggtgatattggatacatcgacgaagatgatgagttgttcatc 626
Query: 295 gttgacagggtgaaggaactcatcaaattcaaaggcttccaagtgcccccagctgaactc 354
||||| ||| |||||||| | ||||||| ||||| || |||||| | ||||||||||||
Sbjct: 627 gttgataggttgaaggaattgatcaaatataaaggttttcaagtggctccagctgaactc 686
Query: 355 gaaggcctt 363
|||| ||||
Sbjct: 687 gaagccctt 695
>gnl|LJGI|TC59755 homologue to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (34%)
Length = 833
Score = 67.9 bits (34), Expect = 7e-11
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 260 ttggttacattgatgatgatgatgagattttcatagttgacagggtgaaggaactcatca 319
||||||| ||||| |||||||||||| | ||||| ||||| ||| |||||||| | ||||
Sbjct: 195 ttggttatattgacgatgatgatgagttgttcatcgttgataggttgaaggaattgatca 254
Query: 320 aattcaaaggcttccaagtgcccccagctgaactcgaaggccttct 365
||| |||||| || || || | ||||||||||| |||| ||||||
Sbjct: 255 aatacaaaggatttcaggttgctccagctgaacttgaagcccttct 300