Miyakogusa Predicted Gene
- Lj6g3v0933430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0933430.1 Non Chatacterized Hit- tr|D8S3F0|D8S3F0_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,42.41,0.000000000000006,coiled-coil,NULL;
seg,NULL,CUFF.58656.1
(924 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69338 similar to UniRef100_A7PJT1 Cluster: Chromosome... 228 5e-59
gnl|LJGI|FS319444 homologue to UniRef100_A7PJT1 Cluster: Chromos... 186 2e-46
>gnl|LJGI|TC69338 similar to UniRef100_A7PJT1 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 687
Score = 228 bits (115), Expect = 5e-59
Identities = 300/362 (82%), Gaps = 6/362 (1%)
Strand = Plus / Plus
Query: 553 gagaagcaggagcttcttgcatatgtggacaaactcaaagcacaacttcaaagacaacac 612
||||||||||||||| |||| |||||| ||| || ||||||||||||||||| ||||||
Sbjct: 49 gagaagcaggagcttgttgcgtatgtgaacatgctaaaagcacaacttcaaaggcaacac 108
Query: 613 attgattcaactgaagtttttgagaagacggagtcttgctcagatacaaaacatgtggac 672
|||||| ||||| ||||||||||||||| ||||| |||||||||||||| ||||| |||
Sbjct: 109 attgatacaactcaagtttttgagaagaaagagtcatgctcagatacaaagcatgttgac 168
Query: 673 ctgactgaagagaatgtggataaagcatgcttaagtgtttctagatctgttcctgacccg 732
| || |||||||||||||||||||||||| |||| ||||||||| | | |||
Sbjct: 169 cctacagaagagaatgtggataaagcatgcctaagcgtttctagagcaat------ccca 222
Query: 733 gcggcggccgagtgtgtggtccagatgccaacagaccaggtgatcattcagcctgttgga 792
|| | || ||| ||| ||||| ||| ||||||| ||||||| |||||||| |||||
Sbjct: 223 gctcctgcagagaatgtagtccacatggcaacagatcaggtgaatattcagccggttggg 282
Query: 793 gacaatgagtggagtgatattcaggcaacagaggcaagagtagctgatgttcgggaagtt 852
||||| || |||||||||||||||||||| ||||| ||| |||||||||| |||||||
Sbjct: 283 gacaacgaatggagtgatattcaggcaacggaggccagaatagctgatgtaagggaagta 342
Query: 853 gcatctgaatctgaagtaagcagcttggacattcctgtgattagccaacaaggtaccaat 912
||| | ||| |||| | || |||| |||||||||||||||||||| | ||||||||||
Sbjct: 343 gcagccgaaactgatggaaacagcacagacattcctgtgattagccagccaggtaccaat 402
Query: 913 ca 914
||
Sbjct: 403 ca 404
>gnl|LJGI|FS319444 homologue to UniRef100_A7PJT1 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (48%)
Length = 804
Score = 186 bits (94), Expect = 2e-46
Identities = 166/190 (87%)
Strand = Plus / Plus
Query: 23 ctctgggaatgatgacaaataagacaactgatggtccaatggatgatttaacaatcatga 82
|||||||||||||| |||||| ||| || ||||| || ||||||||||||||||||||||
Sbjct: 597 ctctgggaatgatgccaaataggactacggatggccctatggatgatttaacaatcatga 656
Query: 83 aggaaactctattggtcaaggatgaggagctacagaattttgctcgagatcttcgtaccc 142
||||||| || ||| || |||||||||||||||||||| |||||||| |||||| | |
Sbjct: 657 aggaaacactcagggttaaagatgaggagctacagaatttggctcgagaccttcgtgcac 716
Query: 143 gggattcaactataagagatatagctgagaaactatctgagactgctgaagctgccgagg 202
||||||| || |||| ||||||||| || ||| |||||||||||||||||||||| ||||
Sbjct: 717 gggattctaccataaaagatatagcagataaattatctgagactgctgaagctgctgagg 776
Query: 203 cagctgcatc 212
|||| |||||
Sbjct: 777 cagcagcatc 786