Miyakogusa Predicted Gene

Lj6g3v0927480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0927480.1 tr|G7L9R3|G7L9R3_MEDTR AP-3 complex subunit
delta-1 OS=Medicago truncatula GN=MTR_8g104380 PE=4
SV=1,78.54,0,seg,NULL; no description,Armadillo-like helical;
SUBFAMILY NOT NAMED,NULL; DELTA ADAPTIN-RELATED,NUL,CUFF.58619.1
         (2922 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053778 similar to UniRef100_A7PGW2 Cluster: Chromosom...   611   e-173

>gnl|LJGI|BP053778 similar to UniRef100_A7PGW2 Cluster: Chromosome chr17 scaffold_16,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr17 scaffold_16, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (6%)
          Length = 545

 Score =  611 bits (308), Expect = e-173
 Identities = 323/327 (98%), Gaps = 1/327 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2596 aggtcgagtttgtctcgaggcaatccttctgataagtcatctagtaagcggaaagagaag 2655
            ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 545  aggtcgagtttgtctcgag-cnatccttctgataagtcatctagtaagcggaaagagaag 487

                                                                        
Query: 2656 aagaaactaggcacatcctctgaaatgaaagaaaatctaggtgatgcagaaaagcctgat 2715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486  aagaaactaggcacatcctctgaaatgaaagaaaatctaggtgatgcagaaaagcctgat 427

                                                                        
Query: 2716 actgaaaacccaaataccagtgaaaatcatggtcataaagagagaaggcggagaggtaag 2775
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426  actgaaaaccccaataccagtgaaaatcatggtcataaagagagaaggcggagaggtaag 367

                                                                        
Query: 2776 gataagattgttgaaggggaagaacatggtcagaaggtaaagaaaaagagcagccaccgc 2835
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366  gataagattgttgaaggggaagaacatggtcagaaggtaaagaaaaagagcagccaccgc 307

                                                                        
Query: 2836 catggtaggcgcaaaactcatcaaagagctgaatcacccttaaatgtggtttcccaaaca 2895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 306  catggtaggcgcaaaactcatcaaagagctgaatcacccttaaatgtggtttccccaaca 247

                                       
Query: 2896 ccagtaattcctgattttcttttgtag 2922
            |||||||||||||||||||||||||||
Sbjct: 246  ccagtaattcctgattttcttttgtag 220