Miyakogusa Predicted Gene
- Lj6g3v0925650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0925650.1 tr|B9GYY2|B9GYY2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_646195 PE=4 SV=1,52.41,0,PIF1,DNA
helicase PIF1, ATP-dependent; no description,NULL; P-loop containing
nucleoside triphosphat,CUFF.58560.1
(1591 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68465 weakly similar to UniRef100_Q6CWC6 Cluster: Klu... 1178 0.0
gnl|LJGI|TC57674 weakly similar to UniRef100_A8BBU9 Cluster: Rrm... 1176 0.0
>gnl|LJGI|TC68465 weakly similar to UniRef100_Q6CWC6 Cluster: Kluyveromyces lactis
strain NRRL Y-1140 chromosome B of strain NRRL Y- 1140
of Kluyveromyces lactis; n=1; Kluyveromyces lactis|Rep:
Kluyveromyces lactis strain NRRL Y-1140 chromosome B of
strain NRRL Y- 1140 of Kluyveromyces lactis -
Kluyveromyces lactis (Yeast) (Candida sphaerica),
partial (12%)
Length = 894
Score = 1178 bits (594), Expect = 0.0
Identities = 594/594 (100%)
Strand = Plus / Plus
Query: 155 gtgggaagcggattcaatggactgaggagcagaagagtgtgctgtctgctgtgagtcaga 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtgggaagcggattcaatggactgaggagcagaagagtgtgctgtctgctgtgagtcaga 357
Query: 215 ggagttctgtgtttattacaggctcagctgggactggaaagacacaactggtcactgagg 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggagttctgtgtttattacaggctcagctgggactggaaagacacaactggtcactgagg 417
Query: 275 ttgtcaagttgttgaagaaattgcacaccaagtctaaggtttttgtcacagcttccactg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttgtcaagttgttgaagaaattgcacaccaagtctaaggtttttgtcacagcttccactg 477
Query: 335 gggttgcagcatttgctctcaagggtcaaactttgcactcatttgccgggattcgttacc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gggttgcagcatttgctctcaagggtcaaactttgcactcatttgccgggattcgttacc 537
Query: 395 ccgttgatgattctgaacaattgttgcgcgtgattaggtctgacaagagggcgtcgagga 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ccgttgatgattctgaacaattgttgcgcgtgattaggtctgacaagagggcgtcgagga 597
Query: 455 ggtggcaaaaggttgaagctttagttattgatgaaattagcatggtggatggaaggttgt 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ggtggcaaaaggttgaagctttagttattgatgaaattagcatggtggatggaaggttgt 657
Query: 515 ttgataaccttcaatttgttgccaaagagttgaagggtgtggataaaacatggggtggaa 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ttgataaccttcaatttgttgccaaagagttgaagggtgtggataaaacatggggtggaa 717
Query: 575 ttcagctggttgtggttggggatttctgtcagttacccccaatcgctgatgatgcttcca 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ttcagctggttgtggttggggatttctgtcagttacccccaatcgctgatgatgcttcca 777
Query: 635 aggttgtaaagtatgcttttgaagctgattgttggaatgacagctttagtttgcaggtag 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aggttgtaaagtatgcttttgaagctgattgttggaatgacagctttagtttgcaggtag 837
Query: 695 agcttactaggatcttcaggcagtctgatccgcggtttatcgaggttcttcaag 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 agcttactaggatcttcaggcagtctgatccgcggtttatcgaggttcttcaag 891
Score = 186 bits (94), Expect = 3e-46
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 1 atgatgagatttttcaccattggaatagcggttggttcatcatgcagaagcttgagcaca 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atgatgagattcttcaccattggaatagcggttggttcatcatgcagaagcttgagcaca 203
Query: 61 aagggttgttcttcaaaaccctcatctgggtcttacat 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aagggttgttcttcaaaaccctcatctgggtcttacat 241
>gnl|LJGI|TC57674 weakly similar to UniRef100_A8BBU9 Cluster: Rrm3p helicase; n=1;
Giardia lamblia ATCC 50803|Rep: Rrm3p helicase - Giardia
lamblia ATCC 50803, partial (8%)
Length = 858
Score = 1176 bits (593), Expect = 0.0
Identities = 596/597 (99%)
Strand = Plus / Plus
Query: 995 taggtgcaagagttatgctggtcaagaatttaaaaacttggaacggattagtgaatggag 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggtgcaagagttatgctggtcaagaatttaaaaacttggaacggattagtgaatggag 60
Query: 1055 ccacgggtacggttgtgaaatttgttaaggaagcgggcattggtgacatctgctccgaaa 1114
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccacgggtagggttgtgaaatttgttaaggaagcgggcattggtgacatctgctccgaaa 120
Query: 1115 acctgctgccagaagtcaaatttgattcggggaaagttgaggtgattggaccagaagagt 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acctgctgccagaagtcaaatttgattcggggaaagttgaggtgattggaccagaagagt 180
Query: 1175 ggcatgtaacggatggagatgtagttgttgctaggaggaagcagataccacttatattgg 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcatgtaacggatggagatgtagttgttgctaggaggaagcagataccacttatattgg 240
Query: 1235 catgggctctgagcatccacaagtgccagggaatgaatcttgacaaagcttacatcaact 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catgggctctgagcatccacaagtgccagggaatgaatcttgacaaagcttacatcaact 300
Query: 1295 tgtcaggagcatttggctgtggaatggtctacacagcactttctcgtgttaaaagcttgg 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtcaggagcatttggctgtggaatggtctacacagcactttctcgtgttaaaagcttgg 360
Query: 1355 atggtcttcatttatctggttttacgccatcaagtattcgagcaaatcctaaggttacaa 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggtcttcatttatctggttttacgccatcaagtattcgagcaaatcctaaggttacaa 420
Query: 1415 atttctataggaatttggttttgcaacgtgataacaaagatactaacaatggttgcattg 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atttctataggaatttggttttgcaacgtgataacaaagatactaacaatggttgcattg 480
Query: 1475 agagaaatcaaatctctaatagcattaccagagattcagaaaaagcaggcactgcagaaa 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agagaaatcaaatctctaatagcattaccagagattcagaaaaagcaggcactgcagaaa 540
Query: 1535 acaagtaccttttttcactctctgatttcctatctagacgcctgaaaggatcctgaa 1591
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaagtaccttttttcactctctgatttcctatctagacgcctgaaaggatcctgaa 597