Miyakogusa Predicted Gene

Lj6g3v0920690.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0920690.1 tr|B9GT26|B9GT26_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_551239 PE=4 SV=1,36.65,4e-18,
,CUFF.58526.1
         (603 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB826644 weakly similar to UniRef100_Q0JP39 Cluster: Os...   646   0.0  

>gnl|LJGI|CB826644 weakly similar to UniRef100_Q0JP39 Cluster: Os01g0246500 protein;
           n=2; Oryza sativa Japonica Group|Rep: Os01g0246500
           protein - Oryza sativa subsp. japonica (Rice), partial
           (8%)
          Length = 496

 Score =  646 bits (326), Expect = 0.0
 Identities = 326/326 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttttgataagtggaactggaaacaacaaaaatgttttgcaacaaacacatgatgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggttttgataagtggaactggaaacaacaaaaatgttttgcaacaaacacatgatgag 230

                                                                       
Query: 61  agggccaaagcacaaggtggtatggtggtgaacaattcacaccagcaaggaaacaggagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 agggccaaagcacaaggtggtatggtggtgaacaattcacaccagcaaggaaacaggagt 290

                                                                       
Query: 121 gttgaaagtgggcgtacacagaatttgtccaacacagggttgatcaaagaaatgacaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gttgaaagtgggcgtacacagaatttgtccaacacagggttgatcaaagaaatgacaaga 350

                                                                       
Query: 181 atggatgaattcaagtacgggtttccttcagaaagcttatcaactacctcaaataaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atggatgaattcaagtacgggtttccttcagaaagcttatcaactacctcaaataaatgg 410

                                                                       
Query: 241 tggggaagtagtgatcatggcgattctactggcaccaacccaggcacagccaagagtcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tggggaagtagtgatcatggcgattctactggcaccaacccaggcacagccaagagtcaa 470

                                     
Query: 301 cctgaagaaagaggaggggaagcaga 326
           ||||||||||||||||||||||||||
Sbjct: 471 cctgaagaaagaggaggggaagcaga 496