Miyakogusa Predicted Gene

Lj6g3v0920680.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0920680.1 tr|G7IXI4|G7IXI4_MEDTR Callose synthase
OS=Medicago truncatula GN=MTR_3g047390 PE=4 SV=1,84.65,0,SUBFAMILY NOT
NAMED,Callose synthase; LYST-INTERACTING PROTEIN LIP5 (DOPAMINE
RESPONSIVE PROTEIN DRG,CUFF.58579.1
         (5751 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosy...    66   3e-09

>gnl|LJGI|BP052274 homologue to UniRef100_A2Q2S3 Cluster: Glycosyl transferase, family
            48; n=1; Medicago truncatula|Rep: Glycosyl transferase,
            family 48 - Medicago truncatula (Barrel medic), partial
            (15%)
          Length = 563

 Score = 65.9 bits (33), Expect = 3e-09
 Identities = 110/133 (82%), Gaps = 2/133 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4021 agggagcatatatttac-tggaagtgtttcatcactgg-cttggtttatgtcaaaccagg 4078
            ||||||||||||||||| |||||||||||| || |||| | ||||| |||||||| ||||
Sbjct: 43   agggagcatatatttacntggaagtgtttcttcgctgggcatggttcatgtcaaatcagg 102

                                                                        
Query: 4079 agaccagctttgtgaccattggccaacgaattttggcaaatcctctaagggtccgatttc 4138
            |||| || || ||||| ||||| ||| || | ||||| ||||| || | ||| || || |
Sbjct: 103  agacaagtttcgtgacaattggtcaaagattgttggctaatcccctgaaggttcgtttcc 162

                         
Query: 4139 attatggtcatcc 4151
            | |||||||||||
Sbjct: 163  actatggtcatcc 175