Miyakogusa Predicted Gene
- Lj6g3v0920480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0920480.1 Non Chatacterized Hit- tr|G7IXM4|G7IXM4_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,73.55,0,FAMILY
NOT NAMED,NULL; coiled-coil,NULL; seg,NULL,CUFF.58518.1
(2082 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU251954 similar to UniRef100_Q9LTQ8 Cluster: Gb|AAF006... 638 0.0
gnl|LJGI|TC68347 similar to UniRef100_A7P0R0 Cluster: Chromosome... 466 e-130
gnl|LJGI|AV419628 weakly similar to UniRef100_A7P0R0 Cluster: Ch... 216 4e-55
gnl|LJGI|TC79918 similar to UniRef100_A7P0R0 Cluster: Chromosome... 145 1e-33
gnl|LJGI|AV767360 weakly similar to UniRef100_A7P0R0 Cluster: Ch... 56 9e-07
>gnl|LJGI|AU251954 similar to UniRef100_Q9LTQ8 Cluster: Gb|AAF00675.1; n=2; Arabidopsis
thaliana|Rep: Gb|AAF00675.1 - Arabidopsis thaliana
(Mouse-ear cress), partial (22%)
Length = 322
Score = 638 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Plus
Query: 886 gtcaactccaagttagttaatgagttagcagatgctaagttatttgcaaagcgctacatg 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaactccaagttagttaatgagttagcagatgctaagttatttgcaaagcgctacatg 60
Query: 946 aaagattatgagaaggaaaggaagggcagagaattgattgaggaagtttgtgatgagctt 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagattatgagaaggaaaggaagggcagagaattgattgaggaagtttgtgatgagctt 120
Query: 1006 gctaatgaaattggagaagacaaagctgaagttgaagcattgaagagggaatctatgaaa 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctaatgaaattggagaagacaaagctgaagttgaagcattgaagagggaatctatgaaa 180
Query: 1066 cttagggaagaaatggaagaggagagaaggatgttacagatggctgaagtatggcgtgaa 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttagggaagaaatggaagaggagagaaggatgttacagatggctgaagtatggcgtgaa 240
Query: 1126 gaacgtgttcatatgaagttgatagatgcaaaaattgctcttgatgagaagtattcacag 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacgtgttcatatgaagttgatagatgcaaaaattgctcttgatgagaagtattcacag 300
Query: 1186 atgaataaacttgtagcagatt 1207
||||||||||||||||||||||
Sbjct: 301 atgaataaacttgtagcagatt 322
>gnl|LJGI|TC68347 similar to UniRef100_A7P0R0 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 606
Score = 466 bits (235), Expect = e-130
Identities = 235/235 (100%)
Strand = Plus / Plus
Query: 1848 ggtatctaatgggggcatcgtgtctcctgactggggacctggtaagggtggactaagccc 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtatctaatgggggcatcgtgtctcctgactggggacctggtaagggtggactaagccc 60
Query: 1908 ccaagacattttatgccagttgagttctccggagtcgggaaatctgcataatcgaggcaa 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaagacattttatgccagttgagttctccggagtcgggaaatctgcataatcgaggcaa 120
Query: 1968 gaaaggatgcattcctcgcactgcacagaagaatagtttgaaagccagacttttggaggc 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaggatgcattcctcgcactgcacagaagaatagtttgaaagccagacttttggaggc 180
Query: 2028 taggatggaaacccagaagtttcagttgcgccatgttcttaaacagaagatttag 2082
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taggatggaaacccagaagtttcagttgcgccatgttcttaaacagaagatttag 235
>gnl|LJGI|AV419628 weakly similar to UniRef100_A7P0R0 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 380
Score = 216 bits (109), Expect = 4e-55
Identities = 232/273 (84%)
Strand = Plus / Plus
Query: 1138 atgaagttgatagatgcaaaaattgctcttgatgagaagtattcacagatgaataaactt 1197
||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||
Sbjct: 1 atgaagttgatagatgccaaagttgctcttgaagacaagtattcgcagatgaataaactt 60
Query: 1198 gtagcagatttggaaacctttgtcaagtcaacagatgtgaactcaaatgcaaaggagatg 1257
|| |||||||||||| | ||| ||||||||| | ||||| | || |||||||||||
Sbjct: 61 gtcgcagatttggaagcttttctcaagtcaaaaagcatgaacccgaacacaaaggagatg 120
Query: 1258 agagaggcacagtcacttcagcaggctgcagctgctgtgaacattcaagacatcaaggga 1317
| |||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||
Sbjct: 121 aaagaggcacagtcacttcaacaggctgcagctgcaatgaacattcaagacatcaaagga 180
Query: 1318 ttttcatacgagccacccaatccagatgatatttttgccatctttgaagatgtaaattcc 1377
||||| || || || ||||| | |||||||||||||| || || ||||||| |||||
Sbjct: 181 ttttcttatgaaccccccaactcggatgatatttttgcaattttcgaagatgcaaatttt 240
Query: 1378 ggtgaaccaaacgagagggagattgaatcatgc 1410
|| || | |||||||||||||||||| |||||
Sbjct: 241 ggcgagtccaacgagagggagattgaaccatgc 273
>gnl|LJGI|TC79918 similar to UniRef100_A7P0R0 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 733
Score = 145 bits (73), Expect = 1e-33
Identities = 112/125 (89%)
Strand = Plus / Plus
Query: 1958 atcgaggcaagaaaggatgcattcctcgcactgcacagaagaatagtttgaaagccagac 2017
||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct: 8 atcgaggcatgaaaggatgcattcctcgcggtgcactgaagaatagtttgaaagccaagc 67
Query: 2018 ttttggaggctaggatggaaacccagaagtttcagttgcgccatgttcttaaacagaaga 2077
||||||||||||| |||||| ||||| | ||||| | ||||||||||||||||||||||
Sbjct: 68 ttttggaggctagattggaaagccagagggttcagatacgccatgttcttaaacagaaga 127
Query: 2078 tttag 2082
|||||
Sbjct: 128 tttag 132
>gnl|LJGI|AV767360 weakly similar to UniRef100_A7P0R0 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 389
Score = 56.0 bits (28), Expect = 9e-07
Identities = 100/124 (80%)
Strand = Plus / Minus
Query: 1959 tcgaggcaagaaaggatgcattcctcgcactgcacagaagaatagtttgaaagccagact 2018
|||||||| ||||||| ||||||||| | || | ||| || ||||||||||||| ||
Sbjct: 314 tcgaggcatgaaaggaagcattcctcccggggccctgaaaaaaagtttgaaagccaagct 255
Query: 2019 tttggaggctaggatggaaacccagaagtttcagttgcgccatgttcttaaacagaagat 2078
|||||||||||| |||||| ||| | | ||||| | ||||||| ||||||| |||||
Sbjct: 254 tttggaggctagattggaaagccaaagggttcagaaaccccatgtttttaaacaaaagat 195
Query: 2079 ttag 2082
||||
Sbjct: 194 ttag 191