Miyakogusa Predicted Gene

Lj6g3v0920300.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0920300.1 Non Chatacterized Hit- tr|K4AAU3|K4AAU3_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si036000,30.66,4e-18,P-loop containing nucleoside triphosphate
hydrolases,NULL; NB-ARC,NB-ARC; CG2471-PA
(LP11415P),NULL;,CUFF.58496.1
         (615 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AI967798 similar to UniRef100_Q8SSD1 Cluster: GOLGI MEM...   149   2e-35

>gnl|LJGI|AI967798 similar to UniRef100_Q8SSD1 Cluster: GOLGI MEMBRANE PROTEIN; n=1;
           Encephalitozoon cuniculi|Rep: GOLGI MEMBRANE PROTEIN -
           Encephalitozoon cuniculi, partial (5%)
          Length = 233

 Score =  149 bits (75), Expect = 2e-35
 Identities = 98/106 (92%)
 Strand = Plus / Plus

                                                                       
Query: 503 ctggtgagatcatcaatgataaagagaggttgataaatgaagctgttaatcattgtcatg 562
           ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 15  ctggtaagatcatcaatgatgaagagaggttgataaatgaagttgttaatcattgtcatg 74

                                                         
Query: 563 gtgttccttcagttgctgaaactctctcaagttggattgctgaaca 608
           || |||||| | |||||||||||||||||  |||||||||||||||
Sbjct: 75  gtcttcctttanttgctgaaactctctcagcttggattgctgaaca 120