Miyakogusa Predicted Gene
- Lj6g3v0920170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0920170.1 tr|G7IXK4|G7IXK4_MEDTR Vacuolar protein
sorting-associated protein-like protein OS=Medicago
truncatu,96,0,EAP30,EAP30; SUBFAMILY NOT NAMED,NULL; EAP30 SUBUNIT OF
ELL COMPLEX,EAP30; "Winged helix" DNA-bindin,CUFF.58482.1
(756 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67719 homologue to UniRef100_A7P0T6 Cluster: Chromoso... 714 0.0
gnl|LJGI|DC598688 homologue to UniRef100_A7P0T6 Cluster: Chromos... 618 e-176
>gnl|LJGI|TC67719 homologue to UniRef100_A7P0T6 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 600
Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus
Query: 397 agtgatcgtggagttgtaactgaggatgattgcttgcgtgctatcagtaagctgaaggtg 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtgatcgtggagttgtaactgaggatgattgcttgcgtgctatcagtaagctgaaggtg 61
Query: 457 ttaggtagtggttttgaagttatttctgttggaaagagaaaacttgttcgctcggttcca 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttaggtagtggttttgaagttatttctgttggaaagagaaaacttgttcgctcggttcca 121
Query: 517 actgaattaaacaaagaccacaatgaaattctagaacttgcccaggctcaagggtttgtg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 actgaattaaacaaagaccacaatgaaattctagaacttgcccaggctcaagggtttgtg 181
Query: 577 acagtcgatgaagtagagaggcggctatcctggacctcgggtcgtgccattgatgccctt 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acagtcgatgaagtagagaggcggctatcctggacctcgggtcgtgccattgatgccctt 241
Query: 637 gacacattacttgatgagggacttgcaatgatcgatgatggccatagggatggtaaacgg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gacacattacttgatgagggacttgcaatgatcgatgatggccatagggatggtaaacgg 301
Query: 697 cgatactggtttccttgtgtatctcccatctcatctttgataggaattgattcctgacaa 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgatactggtttccttgtgtatctcccatctcatctttgataggaattgattcctgacaa 361
>gnl|LJGI|DC598688 homologue to UniRef100_A7P0T6 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 559
Score = 618 bits (312), Expect = e-176
Identities = 319/320 (99%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 1 atgagaagaaggcctggaattggagggttgcagacagctgctgctgcaagggatcaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgagaagaaggcctggaattggagggttgcagacagctgctgctgcaagggatcaatat 300
Query: 61 cggttgctgggtgagaatgtagccaagatcagaaccgatatgatgaaggagcagctttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggttgctgggtgagaatgtagccaagatcagaaccgatatgatgaaggagcagctttcc 360
Query: 121 acttttcgctctcagcttgaagattttgctcgcaaacacaagaatgatatccgcaagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acttttcgctctcagcttgaagattttgctcgcaaacacaagaatgatatccgcaagaac 420
Query: 181 cctgcattcagatcacagtttcatgagatgtgtgctaaagttggagtagatcctttggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctgcattcagatcacagtttcatgagatgtgtgctaaagttggagtagatcctttggcc 480
Query: 241 tcaaataagggtttctgggcagagctgttaggaattggtgacttctactatgaacttgga 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tc-aataagggtttctgggcagagctgttaggaattggtgacttctactatgaacttgga 539
Query: 301 gtacaaatagtggatatttg 320
||||||||||||||||||||
Sbjct: 540 gtacaaatagtggatatttg 559