Miyakogusa Predicted Gene

Lj6g3v0920000.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0920000.1 Non Chatacterized Hit- tr|K4BQJ4|K4BQJ4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.82,1e-18,FAMILY NOT NAMED,NULL; PMD,Aminotransferase-like,
plant mobile domain,CUFF.58477.1
         (831 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV776708 similar to UniRef100_O34071 Cluster: ORF40; n=...    62   6e-09
gnl|LJGI|TC68910                                                       54   1e-06

>gnl|LJGI|AV776708 similar to UniRef100_O34071 Cluster: ORF40; n=1; Streptococcus
           phage O1205|Rep: ORF40 - Streptococcus phage O1205,
           partial (1%)
          Length = 603

 Score = 61.9 bits (31), Expect = 6e-09
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                       
Query: 574 aaatcttgtgatgatggttcaaaaactgtggaggttgataatgatgccgatgttacttct 633
           ||||||| |||||||||||||| || |||| ||||||| |||||||| |||||| |  ||
Sbjct: 509 aaatcttttgatgatggttcaagaagtgtgaaggttgagaatgatgcagatgttccacct 450

                      
Query: 634 ggttttcttcc 644
           || ||||||||
Sbjct: 449 gggtttcttcc 439


>gnl|LJGI|TC68910 
          Length = 656

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 637 tttcttcctaatcatttgcaagttgtcccttttggaaattctgttcaagatggtt 691
           ||||||||||||| |||| ||  ||| |||| ||| |||||||||||||||||||
Sbjct: 215 tttcttcctaatcgtttgaaaaatgttccttctgggaattctgttcaagatggtt 269