Miyakogusa Predicted Gene

Lj6g3v0898670.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0898670.1 Non Chatacterized Hit- tr|D8QPV9|D8QPV9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.16,2e-18,seg,NULL,
NODE_85104_length_1265_cov_8.649012.path2.1
         (1125 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW626441 similar to UniRef100_A7PGT2 Cluster: Chromosom...   640   0.0  
gnl|LJGI|BG662197                                                      72   8e-12

>gnl|LJGI|BW626441 similar to UniRef100_A7PGT2 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 444

 Score =  640 bits (323), Expect = 0.0
 Identities = 326/327 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtaccgaattcgaaacaattgagggaaggataacatgtatgctttcgcagctacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atgggtaccgaattcgaaacaattgagggaaggataacatgtatgctttcgcagctacaa 177

                                                                       
Query: 61  tccgagtgtggcatccttcatagaatggtttacaagaacaagaaccagcaccgccgctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tccgagtgtggcatccttcatagaatggtttacaagaacaagaaccagcaccgccgctgt 237

                                                                       
Query: 121 ggctatttccagcgtctcttgaaggtgagaagggatttgaggcttctgcaatctgcaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggctatttccagcgtctcttgaaggtgagaagggatttgaggcttctgcaatctgcaaac 297

                                                                       
Query: 181 ttggaagagcttgttacatcatgtttccttgttatcaaaggagataggccaaaacagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ttggaagagcttgttacatcatgtttccttgttatcaaaggagataggccaaaacagaag 357

                                                                       
Query: 241 gttcatcttttagagagcttgaaaaggagaaaatgcgatggtgaaaagcataattttttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gttcatcttttagagagcttgaaaaggagaaaatgcgatggtgaaaagcataattttttg 417

                                      
Query: 301 gagcgccttttaggagctgcacgatta 327
           ||||||||||||||||| |||||||||
Sbjct: 418 gagcgccttttaggagccgcacgatta 444


>gnl|LJGI|BG662197 
          Length = 310

 Score = 71.9 bits (36), Expect = 8e-12
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 143 aggtgagaagggatttgaggcttctgcaatctgcaaacttggaagagcttgttac 197
           |||||||||||| | |||||||||||||||||||||||||||| || ||||||||
Sbjct: 257 aggtgagaaggg-tatgaggcttctgcaatctgcaaacttggaggancttgttac 310