Miyakogusa Predicted Gene
- Lj6g3v0896480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0896480.1 Non Chatacterized Hit- tr|I1N0T6|I1N0T6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.21,0,TRYPTOPHAN
SYNTHASE BETA CHAIN,Tryptophan synthase, beta chain; SER/THR
DEHYDRATASE, TRP SYNTHASE,NU,CUFF.58445.1
(1413 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59521 homologue to UniRef100_Q5KT13 Cluster: Tryptoph... 1382 0.0
gnl|LJGI|TC67961 homologue to UniRef100_A7P0U9 Cluster: Chromoso... 912 0.0
gnl|LJGI|TC57200 homologue to UniRef100_O50046 Cluster: Tryptoph... 450 e-125
gnl|LJGI|TC77270 similar to UniRef100_Q5KT13 Cluster: Tryptophan... 238 8e-62
>gnl|LJGI|TC59521 homologue to UniRef100_Q5KT13 Cluster: Tryptophan synthase beta
subunit; n=1; Persicaria tinctoria|Rep: Tryptophan
synthase beta subunit - Persicaria tinctoria, partial
(34%)
Length = 743
Score = 1382 bits (697), Expect = 0.0
Identities = 697/697 (100%)
Strand = Plus / Plus
Query: 1 atggctacctcctccattgcaagcctcaactcaccttcaaggttgctttccattccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggctacctcctccattgcaagcctcaactcaccttcaaggttgctttccattccaaaa 106
Query: 61 gagccatacccatcttcccatttctcctcaaacctgctcaagtttgcagctcccagaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gagccatacccatcttcccatttctcctcaaacctgctcaagtttgcagctcccagaacc 166
Query: 121 ccttcttcttctgtctcctgctccctcacaagagaccctgcctctgttcttccactggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ccttcttcttctgtctcctgctccctcacaagagaccctgcctctgttcttccactggag 226
Query: 181 caacgcgtcgagctcaacaatggggcgcttctgcatcagagacctgattcatttggcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 caacgcgtcgagctcaacaatggggcgcttctgcatcagagacctgattcatttggcagg 286
Query: 241 tttgggaagtttggtggcaagtatgtccctgaaactctaatgcacgctctcaccgagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tttgggaagtttggtggcaagtatgtccctgaaactctaatgcacgctctcaccgagctt 346
Query: 301 gaggcggcgtttcattccctcactgctgatgaggattttcagagagagctggctggaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaggcggcgtttcattccctcactgctgatgaggattttcagagagagctggctggaatt 406
Query: 361 ctaaaagattatgttggtcgggagagtcctctttattttgcagaaaggttgacagagcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ctaaaagattatgttggtcgggagagtcctctttattttgcagaaaggttgacagagcac 466
Query: 421 tacaagaggcctaatggtgaagggcctcacatttatctgaagagggaagatcttaatcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tacaagaggcctaatggtgaagggcctcacatttatctgaagagggaagatcttaatcac 526
Query: 481 accggggctcacaaaattaacaatgctgttgcccaggctttgcttgccaagagtttaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 accggggctcacaaaattaacaatgctgttgcccaggctttgcttgccaagagtttaggc 586
Query: 541 aagaaacgcattattgctgaaactggagccggtcagcatggagttgccactgcaactgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aagaaacgcattattgctgaaactggagccggtcagcatggagttgccactgcaactgta 646
Query: 601 tgtgctcgatttggtctagaatgcattatttatatgggtgcacaggatatggaaaggcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tgtgctcgatttggtctagaatgcattatttatatgggtgcacaggatatggaaaggcag 706
Query: 661 gcactcaatgttttcaggatgcgtcttcttggtgctg 697
|||||||||||||||||||||||||||||||||||||
Sbjct: 707 gcactcaatgttttcaggatgcgtcttcttggtgctg 743
>gnl|LJGI|TC67961 homologue to UniRef100_A7P0U9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 695
Score = 912 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Plus
Query: 954 tttccatgaatttgttgatgacaaagatgttaggctaattggtgtggaggctgctggatt 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccatgaatttgttgatgacaaagatgttaggctaattggtgtggaggctgctggatt 60
Query: 1014 tggcctggacagtggcaagcatgctgcgacattaacgaagggagaagttggggttttgca 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcctggacagtggcaagcatgctgcgacattaacgaagggagaagttggggttttgca 120
Query: 1074 tggagctatgagctatttgcttcaggatgatgatggccaaatagtcgagcctcactctat 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggagctatgagctatttgcttcaggatgatgatggccaaatagtcgagcctcactctat 180
Query: 1134 cagtgcaggcttggactaccctggcgttggacctgaacatagctttttgaaggatttagg 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagtgcaggcttggactaccctggcgttggacctgaacatagctttttgaaggatttagg 240
Query: 1194 gcgtgctgaatattatagcatcactgatgaagaagcattggaagctttcaagagagtttc 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgtgctgaatattatagcatcactgatgaagaagcattggaagctttcaagagagtttc 300
Query: 1254 acgacttgaaggcataattccagctctggagacatctcatgcgttggcatacctagagaa 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgacttgaaggcataattccagctctggagacatctcatgcgttggcatacctagagaa 360
Query: 1314 agtgtgtccaacccttcctaatggaaccaaggttgtgcttaacttcagtggccgaggtga 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtgtgtccaacccttcctaatggaaccaaggttgtgcttaacttcagtggccgaggtga 420
Query: 1374 taaggatgttcaaactgctatcaagtacttgaaggtttga 1413
||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaggatgttcaaactgctatcaagtacttgaaggtttga 460
>gnl|LJGI|TC57200 homologue to UniRef100_O50046 Cluster: Tryptophan synthase beta chain
2, chloroplast precursor; n=1; Camptotheca acuminata|Rep:
Tryptophan synthase beta chain 2, chloroplast precursor -
Camptotheca acuminata, partial (43%)
Length = 911
Score = 450 bits (227), Expect = e-125
Identities = 522/619 (84%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 795 tttgggttctgtggctgggccgcatccatatccaatgatggtaagggagtttcatgctgt 854
||||||||| || || || || ||||| ||||| |||||| |||| |||||||| || ||
Sbjct: 2 tttgggttcggttgcgggaccacatccgtatcctatgatg-taagagagtttcaagccgt 60
Query: 855 gattggcaaggaaaccagaaagcaagctttggaaaaatggggagggctaccagatgtcct 914
||||||||| ||||| ||||||||||| ||||| |||||||||||| |||||| | ||
Sbjct: 61 gattggcaaagaaacaagaaagcaagcattggagaaatggggagggaagccagatattct 120
Query: 915 gattgcttgtgttggtggaggttcaaacgccatgggacttttccatgaatttgttgatga 974
| | || ||||||||||| ||||| || || ||||||||||||||||||||| | |||||
Sbjct: 121 ggtagcatgtgttggtggtggttcgaatgcgatgggacttttccatgaatttatcgatga 180
Query: 975 caaagatgttaggctaattggtgtggaggctgctggatttggcctggacagtggcaagca 1034
||||||||||||||| ||||| |||||||||||||| || ||||| || || || |||||
Sbjct: 181 caaagatgttaggctgattggagtggaggctgctgggttgggcctagaaagcggtaagca 240
Query: 1035 tgctgcgacattaacgaagggagaagttggggttttgcatggagctatgagctatttgct 1094
||| || |||||||| || ||||| | || |||||||||||||| ||||||||| | |
Sbjct: 241 tgccgctacattaacaaaaggagagatcggagttttgcatggagcaatgagctatctttt 300
Query: 1095 tcaggatgatgatggccaaatagtcgagcctcactctatcagtgcaggcttggactaccc 1154
|| ||||||||||| |||||| | |||||||||||||| |||||||| |||||||||||
Sbjct: 301 gcaagatgatgatgggcaaataattgagcctcactctattagtgcagggttggactaccc 360
Query: 1155 tggcgttggacctgaacatagctttttgaaggatttagggcgtgctgaatattatagcat 1214
||| |||||||| || |||||||| ||||| ||| ||||||| |||||||| || || |
Sbjct: 361 tggggttggaccagagcatagcttcttgaaagatgtagggcgggctgaatactacagtgt 420
Query: 1215 cactgatgaagaagcattggaagctttcaagagagtttcacgacttgaaggcataattcc 1274
||||||||||||||| | |||||||| || ||| | || | || ||||||||||||||
Sbjct: 421 tactgatgaagaagcactagaagcttttaaaagactgtcccagctggaaggcataattcc 480
Query: 1275 agctctggagacatctcatgcgttggcatacctagagaaagtgtgtccaacccttcctaa 1334
|||| |||||||||||||||| ||||| || ||||||| | ||||| |||||||| ||
Sbjct: 481 agctttggagacatctcatgctttggcttatttagagaagctctgtcctacccttccgaa 540
Query: 1335 tggaaccaaggttgtgcttaacttcagtggccgaggtgataaggatgttcaaactgctat 1394
|||||| ||||||||| |||||| ||||||| |||| |||||||||||||||||||||
Sbjct: 541 tggaactaaggttgtggttaactgcagtggcagaggggataaggatgttcaaactgcttc 600
Query: 1395 caagtacttgaaggtttga 1413
||||||||| || ||||||
Sbjct: 601 caagtacttcaatgtttga 619
>gnl|LJGI|TC77270 similar to UniRef100_Q5KT13 Cluster: Tryptophan synthase beta
subunit; n=1; Persicaria tinctoria|Rep: Tryptophan
synthase beta subunit - Persicaria tinctoria, partial
(40%)
Length = 743
Score = 238 bits (120), Expect = 8e-62
Identities = 459/564 (81%), Gaps = 6/564 (1%)
Strand = Plus / Plus
Query: 221 gacctgattcatttggcaggtttgggaagtttggtggcaagtatgtccctgaaactctaa 280
|||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||| |
Sbjct: 182 gacccgattcatttggccggtatggtcggtttggtggcaagtatgtccctgaaactctca 241
Query: 281 tgcacgctctcaccgagcttgaggcggcgtttcattccctcactgctgatgaggattttc 340
|||| || |||| ||||| ||||| ||||| |||||||| || |||||| | || |
Sbjct: 242 tgcatgcaatcactgagctagaggcagcgttccattcccttgctcatgatgaagccttcc 301
Query: 341 agagagagctggctggaattctaaaagattatgttggtcgggagagtcctcttta-tttt 399
||| |||||| | ||| || || | || ||||| ||| ||||||| || ||||| ||||
Sbjct: 302 agaaagagcttggtgggatactgagggactatgtgggtagggagagcccactttactttt 361
Query: 400 gcagaaaggttgacagagcactacaagaggcctaatggtgaagggcctcacatttatctg 459
|| || || |||| |||||||||| | | | |||| ||||||||||| | ||||||
Sbjct: 362 gctgagagactgactgagcactacaggcgtggtgatggggaagggcctcatgtgtatctg 421
Query: 460 aagagggaagat-cttaatcacaccggggctcacaaaattaacaatgctgttgcccaggc 518
|||||||| ||| || || ||||| || ||||| || ||||| ||||||||||| |||||
Sbjct: 422 aagagggaggattctcaaccacactggtgctcataagattaataatgctgttgctcaggc 481
Query: 519 tttgcttgccaagagtttaggcaagaaacgcattattgctgaaactggagccggtcagca 578
||||||||||||||| || || ||||| | |||||||||| ||||| || || |||||
Sbjct: 482 tttgcttgccaagaggttggggaagaagagggttattgctgagactggtgctgggcagca 541
Query: 579 tggagttgccactgcaactgtatgtgctcgatttggtctagaatgcattatttatatggg 638
|||||| || ||||| ||||| |||||||| || || | ||||| || ||||||||||
Sbjct: 542 tggagtcgctactgccactgtgtgtgctcggttcgggttggaatgtgttgtttatatggg 601
Query: 639 tgcacaggatatggaaaggcaggcactcaatgttttcaggatgcgtcttcttggtgctga 698
||| || ||||||||||||||| | || ||||||||||| |||||||| |||||||||||
Sbjct: 602 tgctca-gatatggaaaggcagtcccttaatgttttcagaatgcgtctacttggtgctga 660
Query: 699 ggtgagacctgtccatgccgggactgccactctcaaggatgctacatcagaggctataag 758
|||||| | || ||| | |||||||| || || || |||||||| ||||| ||||||||
Sbjct: 661 -gtgagagcagtacattctgggactgctacgctgaa-gatgctacgtcagaagctataag 718
Query: 759 ggactgggtgactaatgtagagac 782
||| |||||||||||||| |||||
Sbjct: 719 gga-tgggtgactaatgtggagac 741