Miyakogusa Predicted Gene
- Lj6g3v0885350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0885350.1 Non Chatacterized Hit- tr|I3SWH4|I3SWH4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,90.86,0,TRANSLATION INITIATION INHIBITOR,YjgF/Yer057p/UK114
family; YjgF-like,Endoribonuclease L-PSP/chorism,CUFF.58437.1
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64398 similar to UniRef100_A7P0Q8 Cluster: Chromosome... 852 0.0
gnl|LJGI|TC65065 similar to UniRef100_A7P0Q8 Cluster: Chromosome... 426 e-119
gnl|LJGI|TC80950 similar to UniRef100_A7P0Q8 Cluster: Chromosome... 210 6e-54
>gnl|LJGI|TC64398 similar to UniRef100_A7P0Q8 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 864
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 96 taagcgctcttcaccgttcgcttgcttgagcctttccactgatacccggaccaaggaagc 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taagcgctcttcaccgttcgcttgcttgagcctttccactgatacccggaccaaggaagc 240
Query: 156 tgttcagactgaaaaggcccctgctgctttggggccatattctcaagcaatcaaggccaa 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttcagactgaaaaggcccctgctgctttggggccatattctcaagcaatcaaggccaa 300
Query: 216 caaccttctgtttgtgtccggtgttcttggtcttgatcctgagacaggaaaattcatctc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaccttctgtttgtgtccggtgttcttggtcttgatcctgagacaggaaaattcatctc 360
Query: 276 tgataatgttgaagatcagacagagcagattctcaaaaatatgggggagatcctaaaatc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgataatgttgaagatcagacagagcagattctcaaaaatatgggggagatcctaaaatc 420
Query: 336 tgggggagcgagctacacatcagttgttaagacaacaattttgttggctgacttgaagga 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgggggagcgagctacacatcagttgttaagacaacaattttgttggctgacttgaagga 480
Query: 396 cttcaagaaagttaatgagatctatgctaaatacttcacttcacctgccccggctcgttc 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttcaagaaagttaatgagatctatgctaaatacttcacttcacctgccccggctcgttc 540
Query: 456 aacatatcaagtagctgctttgccattggacgccaagattgaaattgagtgcatagcagc 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacatatcaagtagctgctttgccattggacgccaagattgaaattgagtgcatagcagc 600
Query: 516 actgtgagct 525
||||||||||
Sbjct: 601 actgtgagct 610
Score = 186 bits (94), Expect = 9e-47
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 atggcgttgtggtctgctgcaaagagcttccatgtcccagcaaacgtcggcgttctgcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggcgttgtggtctgctgcaaagagcttccatgtcccagcaaacgtcggcgttctgcgc 106
Query: 61 cgcggcgcttcatgggctgccggaattgccggag 94
||||||||||||||||||||||||||||||||||
Sbjct: 107 cgcggcgcttcatgggctgccggaattgccggag 140
>gnl|LJGI|TC65065 similar to UniRef100_A7P0Q8 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 913
Score = 426 bits (215), Expect = e-119
Identities = 371/423 (87%)
Strand = Plus / Plus
Query: 96 taagcgctcttcaccgttcgcttgcttgagcctttccactgatacccggaccaaggaagc 155
||||||| |||| || ||| ||||||||||| |||| ||||| |||| | ||||||||
Sbjct: 190 taagcgcccttcgccattcacttgcttgagcatttcttctgatgcccgaattaaggaagc 249
Query: 156 tgttcagactgaaaaggcccctgctgctttggggccatattctcaagcaatcaaggccaa 215
|||||| ||||| | ||||||||| |||||||| || ||||||||||| | ||| | |||
Sbjct: 250 tgttcatactgagagggcccctgcagctttgggaccgtattctcaagctaacaaagtcaa 309
Query: 216 caaccttctgtttgtgtccggtgttcttggtcttgatcctgagacaggaaaattcatctc 275
|||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||
Sbjct: 310 caaccttctgtttgtgtctggtgttcttggtcttgttcctgagacggggaaattcatctc 369
Query: 276 tgataatgttgaagatcagacagagcagattctcaaaaatatgggggagatcctaaaatc 335
||||||||||||||| || ||||| ||| |||| ||||| |||||||| ||||| ||| |
Sbjct: 370 tgataatgttgaagagcaaacagaacagcttcttaaaaacatgggggaaatccttaaagc 429
Query: 336 tgggggagcgagctacacatcagttgttaagacaacaattttgttggctgacttgaagga 395
||| || || |||||| | || |||||||||||||||||| |||||||||||||||||||
Sbjct: 430 tggtggtgctagctactcgtcggttgttaagacaacaattatgttggctgacttgaagga 489
Query: 396 cttcaagaaagttaatgagatctatgctaaatacttcacttcacctgccccggctcgttc 455
|||||||||||| |||||||| ||||||||||| ||| |||||||| ||| ||||||||
Sbjct: 490 cttcaagaaagtcaatgagatttatgctaaatatttcccttcacctttcccagctcgttc 549
Query: 456 aacatatcaagtagctgctttgccattggacgccaagattgaaattgagtgcatagcagc 515
||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 550 aacttatcaagtagctgctttgccattggatgccaagattgaaatcgagtgcatagcaac 609
Query: 516 act 518
|||
Sbjct: 610 act 612
>gnl|LJGI|TC80950 similar to UniRef100_A7P0Q8 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 468
Score = 210 bits (106), Expect = 6e-54
Identities = 202/234 (86%)
Strand = Plus / Plus
Query: 96 taagcgctcttcaccgttcgcttgcttgagcctttccactgatacccggaccaaggaagc 155
||||||| |||| || ||| ||||||||||| |||| ||||| |||| | ||||||||
Sbjct: 229 taagcgcccttcgccattcacttgcttgagcatttcttctgatgcccgaattaaggaagc 288
Query: 156 tgttcagactgaaaaggcccctgctgctttggggccatattctcaagcaatcaaggccaa 215
|||||| ||||| | ||||||||| |||||||| || ||||||||||| | ||| | |||
Sbjct: 289 tgttcatactgagagggcccctgcagctttgggaccgtattctcaagctaacaaagtcaa 348
Query: 216 caaccttctgtttgtgtccggtgttcttggtcttgatcctgagacaggaaaattcatctc 275
|||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||
Sbjct: 349 caaccttctgtttgtgtctggtgttcttggtcttgttcctgagacggggaaattcatctc 408
Query: 276 tgataatgttgaagatcagacagagcagattctcaaaaatatgggggagatcct 329
||||||||||||||| || ||||| ||| |||| ||||| |||||||| |||||
Sbjct: 409 tgataatgttgaagagcaaacagaacagcttcttaaaaacatgggggaaatcct 462