Miyakogusa Predicted Gene

Lj6g3v0871210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0871210.1 Non Chatacterized Hit- tr|I3S7M7|I3S7M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,92.68,0.00000000000006, ,CUFF.58419.1
         (135 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65401 similar to UniRef100_A7P0Q0 Cluster: Chromosome...   234   1e-61
gnl|LJGI|CN824982 similar to UniRef100_A7P0Q0 Cluster: Chromosom...    94   2e-19

>gnl|LJGI|TC65401 similar to UniRef100_A7P0Q0 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 863

 Score =  234 bits (118), Expect = 1e-61
 Identities = 131/135 (97%), Gaps = 4/135 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcggagggtgtttggtagaattgctgggttgttcagcaatcgaaattttgagggagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atgcggagggtgtttggtagaattgctgggttgttcagcaatcgaaattttgagggagtg 167

                                                                       
Query: 61  gacaaagcagggaacaaatacttcaccagaaaggaacagattgatggtagcagtaatgaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 168 gacaaagcagggaacaaatacttcaccagaaaggaacagattgatggtagc----atgaa 223

                          
Query: 121 agagaagagatgggt 135
           |||||||||||||||
Sbjct: 224 agagaagagatgggt 238


>gnl|LJGI|CN824982 similar to UniRef100_A7P0Q0 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (80%)
          Length = 703

 Score = 93.7 bits (47), Expect = 2e-19
 Identities = 60/64 (93%), Gaps = 4/64 (6%)
 Strand = Plus / Plus

                                                                       
Query: 72  gaacaaatacttcaccagaaaggaacagattgatggtagcagtaatgaaagagaagagat 131
           ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 1   gaacaaatacttcaccagaaaggaacagattgatggtagc----atgaaagagaagagat 56

               
Query: 132 gggt 135
           ||||
Sbjct: 57  gggt 60