Miyakogusa Predicted Gene
- Lj6g3v0870190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0870190.1 tr|G7IY23|G7IY23_MEDTR ATP synthase gamma chain
OS=Medicago truncatula GN=MTR_3g052270 PE=3 SV=1,79.08,0,no
description,NULL; ATP-synt,ATPase, F1 complex, gamma subunit;
seg,NULL; ATPsyn_F1gamma: ATP synth,CUFF.58416.1
(921 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72701 similar to UniRef100_A7QZP5 Cluster: Chromosome... 686 0.0
gnl|LJGI|BP029091 similar to UniRef100_P0C1M0 Cluster: ATP synth... 248 5e-65
gnl|LJGI|TC58919 similar to UniRef100_P28552 Cluster: ATP syntha... 82 7e-15
gnl|LJGI|TC71482 homologue to UniRef100_Q9SUI9 Cluster: ATP synt... 74 2e-12
gnl|LJGI|TC67723 homologue to UniRef100_P29790 Cluster: ATP synt... 74 2e-12
>gnl|LJGI|TC72701 similar to UniRef100_A7QZP5 Cluster: Chromosome chr10 scaffold_282,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_282, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 570
Score = 686 bits (346), Expect = 0.0
Identities = 349/350 (99%)
Strand = Plus / Plus
Query: 1 atgaagctcgtcgccgccgccagggtccggcgagctcaagaagctgtcgtcaatggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atgaagctcgtcgccgccgccagggtccggcgagctcaagaagctgtcgtcaatggaaga 280
Query: 61 cccttctccgagaccctcgctgaaatgttgcacgacatcaacgaccgtgtccgagacgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cccttctccgagaccctcgctgaaatgttgcacgacatcaacgaccgtgtccgagacgac 340
Query: 121 gacgtcgaggttactctttgcaacgtcaggccagtcaagaaggttgcgcttgtcgtcgtc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gacgtcgaggttcctctttgcaacgtcaggccagtcaagaaggttgcgcttgtcgtcgtc 400
Query: 181 accggagaccgtggactctgcggcgggttcaacaatgcggtggtgaagaaagctcagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 accggagaccgtggactctgcggcgggttcaacaatgcggtggtgaagaaagctcagacc 460
Query: 241 agaatcgaggagttgaggaaacttgggttggattgcgttgtgatcagtgttggcaaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agaatcgaggagttgaggaaacttgggttggattgcgttgtgatcagtgttggcaaaaag 520
Query: 301 ggtaactcgtttttcagtcgtagggattttgtagaggttgataggtttgt 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggtaactcgtttttcagtcgtagggattttgtagaggttgataggtttgt 570
>gnl|LJGI|BP029091 similar to UniRef100_P0C1M0 Cluster: ATP synthase subunit gamma,
chloroplast precursor [Contains: Inceptin]; n=1; Zea
mays|Rep: ATP synthase subunit gamma, chloroplast
precursor [Contains: Inceptin] - Zea mays (Maize),
partial (10%)
Length = 447
Score = 248 bits (125), Expect = 5e-65
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 797 ctgataatgcaattgagttgacgaagaatctttcagttgcatacaatagggagcggcagg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctgataatgcaattgagttgacgaagaatctttcagttgcatacaatagggagcggcagg 388
Query: 857 cgaaaataactggggagttattggagattgtggcaggagctgaggcactaacaccaattg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cgaaaataactggggagttattggagattgtggcaggagctgaggcactaacaccaattg 328
Query: 917 attga 921
|||||
Sbjct: 327 attga 323
>gnl|LJGI|TC58919 similar to UniRef100_P28552 Cluster: ATP synthase gamma chain,
chloroplast precursor; n=1; Pisum sativum|Rep: ATP
synthase gamma chain, chloroplast precursor - Pisum
sativum (Garden pea), partial (94%)
Length = 1313
Score = 81.8 bits (41), Expect = 7e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 32 gagctcaagaagctgtcgtcaatggaagacccttctccgagaccctcgctgaa 84
|||||||||||||||| |||||||||||||||||||| |||||||||| ||||
Sbjct: 339 gagctcaagaagctgttgtcaatggaagacccttctcagagaccctcgttgaa 391
Score = 73.8 bits (37), Expect = 2e-12
Identities = 127/157 (80%)
Strand = Plus / Plus
Query: 667 tttgagcaagacccggttcagattcttgatgccatgatgcctctttatttgaacagtcag 726
|||||||| ||||| |||||||| |||||||| || | ||||| ||||||||||||||
Sbjct: 968 tttgagcaggaccctgttcagatccttgatgctctgcttcctctgtatttgaacagtcaa 1027
Query: 727 attttgaggagcttgcaagaatcactggctagtgagcttgctgctagaatgggtgccatg 786
| |||||| ||||| || |||||||| |||||||||||||| ||||| | || |||
Sbjct: 1028 gtgttgagggcgttgcaggagtcactggcgagtgagcttgctgcgcgaatgagcgcgatg 1087
Query: 787 tctaatgccactgataatgcaattgagttgacgaaga 823
|||||| | ||||||||| | ||| |||| |||||
Sbjct: 1088 agtaatgcgagtgataatgctagtgacttgaagaaga 1124
Score = 69.9 bits (35), Expect = 3e-11
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 376 aaagacgcacaaactatagctgatgatgttttttcactttttgttagtgaggaagttgat 435
||||| || ||| |||| || ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 683 aaagaggctcaagctattgcagatgatgttttctcactgtttgtgagtgaggaggttgat 742
Query: 436 aaggttgagcttgtgtttactaaatttgtgtctttggttaagtttgatcctgtgattca 494
||||||||||| ||| || || |||||||| ||||| || | || |||||||||||
Sbjct: 743 aaggttgagctcttgtacacaaagtttgtgtcgttggtgaaatcggaccctgtgattca 801
>gnl|LJGI|TC71482 homologue to UniRef100_Q9SUI9 Cluster: ATP synthase gamma chain,
chloroplast; n=1; Arabidopsis thaliana|Rep: ATP synthase
gamma chain, chloroplast - Arabidopsis thaliana
(Mouse-ear cress), partial (37%)
Length = 541
Score = 73.8 bits (37), Expect = 2e-12
Identities = 127/157 (80%)
Strand = Plus / Plus
Query: 667 tttgagcaagacccggttcagattcttgatgccatgatgcctctttatttgaacagtcag 726
|||||||| ||||| |||||||| |||||||| || | ||||| ||||||||||||||
Sbjct: 100 tttgagcaggaccctgttcagatccttgatgctctgcttcctctgtatttgaacagtcaa 159
Query: 727 attttgaggagcttgcaagaatcactggctagtgagcttgctgctagaatgggtgccatg 786
| |||||| ||||| || |||||||| |||||||||||||| ||||| | || |||
Sbjct: 160 gtgttgagggcgttgcaggagtcactggcgagtgagcttgctgcgcgaatgagcgcgatg 219
Query: 787 tctaatgccactgataatgcaattgagttgacgaaga 823
|||||| | ||||||||| | ||| |||| |||||
Sbjct: 220 agtaatgcgagtgataatgctagtgacttgaagaaga 256
>gnl|LJGI|TC67723 homologue to UniRef100_P29790 Cluster: ATP synthase gamma chain,
chloroplast precursor; n=1; Nicotiana tabacum|Rep: ATP
synthase gamma chain, chloroplast precursor - Nicotiana
tabacum (Common tobacco), partial (38%)
Length = 741
Score = 73.8 bits (37), Expect = 2e-12
Identities = 127/157 (80%)
Strand = Plus / Plus
Query: 667 tttgagcaagacccggttcagattcttgatgccatgatgcctctttatttgaacagtcag 726
|||||||| ||||| |||||||| |||||||| || | ||||| ||||||||||||||
Sbjct: 209 tttgagcaggaccctgttcagatccttgatgctctgcttcctctgtatttgaacagtcaa 268
Query: 727 attttgaggagcttgcaagaatcactggctagtgagcttgctgctagaatgggtgccatg 786
| |||||| ||||| || |||||||| |||||||||||||| ||||| | || |||
Sbjct: 269 gtgttgagggcgttgcaggagtcactggcgagtgagcttgctgcgcgaatgagcgcgatg 328
Query: 787 tctaatgccactgataatgcaattgagttgacgaaga 823
|||||| | ||||||||| | ||| |||| |||||
Sbjct: 329 agtaatgcgagtgataatgctagtgacttgaagaaga 365