Miyakogusa Predicted Gene
- Lj6g3v0857630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0857630.1 Non Chatacterized Hit- tr|I1N0M7|I1N0M7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,79.56,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopepti,CUFF.58401.1
(2347 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335876 weakly similar to UniRef100_A7PRP0 Cluster: Ch... 1285 0.0
gnl|LJGI|FS362350 similar to UniRef100_A7PRP0 Cluster: Chromosom... 676 0.0
>gnl|LJGI|FS335876 weakly similar to UniRef100_A7PRP0 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 662
Score = 1285 bits (648), Expect = 0.0
Identities = 651/652 (99%)
Strand = Plus / Plus
Query: 1 atgctgagactaaccaccttgagaccaaccataaaccttagcatcttagagacacagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 atgctgagactaaccaccttgagaccaaccataaaccttagcatcttagagacacagcta 70
Query: 61 caacgatgccaatgcctaagacaattcaatcagattctgtctcagatgatcctcacaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 caacgatgccaatgcctaagacaattcaatcagattctgtctcagatgatcctcacaggc 130
Query: 121 ttcatcacagacacctatgctgcaagcaggatcatcaacttctccactcactccacttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ttcatcacagacacctatgctgcaagcaggatcatcaacttctccactcactccacttcc 190
Query: 181 attcccttccatcattccctccgaatattcaaccacctccacaaccccaacaccttcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 attcccttccatcattccctccgaatattcaaccacctccacaaccccaacaccttcact 250
Query: 241 tggaacaccatcatgcgtgcccacttggaacttcacaactcaccccatcaagctctcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tggaacaccatcatgcgtgcccacttggaacttcacaactcaccccatcaagctctcatc 310
Query: 301 ttgtacaagctctttcttttggagaatgcagctcctgatagctacacctacccaattctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttgtacaagctctttcttttggagaatgcagctcctgatagctacacctacccaattctc 370
Query: 361 ctcggatcctgcactgcccgggtggcggtattcgaaggaaaggaaattcaggaccatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctcggatcctgcactgcccgggtggcggtattcgaaggaaaggaaattcaggaccatgtt 430
Query: 421 gtcaagctgggttttggttctgatgtttatgtcaggaacacgctgatcaagttgtatgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtcaagctgggttttggttctgatgtttatgtcaggaacacgctgatcaagttgtatgct 490
Query: 481 gtttgcggggacatggtgggtgcccgcaaagtgtttgaggaaattcctgtgttggatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtttgcggggacatggtgggtgcccgcaaagtgtttgaggaaattcctgtgttggatttg 550
Query: 541 gtttcttggaataccctattgtctgggtatgttcagacgggtgatgtggaggaagcagaa 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 551 gtttcttggaataccctattgtctgggtatattcagacgggtgatgtggaggaagcagaa 610
Query: 601 cgcgtgtacggccggatgccggagaggaacacaattgcttccaactcgatgg 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cgcgtgtacggccggatgccggagaggaacacaattgcttccaactcgatgg 662
>gnl|LJGI|FS362350 similar to UniRef100_A7PRP0 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 773
Score = 676 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Minus
Query: 2007 tcagataaatgacatcgagcacatgctagatgtagtggctgcaaaacttaagattgaggg 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tcagataaatgacatcgagcacatgctagatgtagtggctgcaaaacttaagattgaggg 714
Query: 2067 ctattcaccaattacaagtgaggtttcacttgatatagatgaagaagagaaagaaactgt 2126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ctattcaccaattacaagtgaggtttcacttgatatagatgaagaagagaaagaaactgt 654
Query: 2127 cctttcaaggcacagtgagaaacttgcagttgcctttggacttatcactattgttccacc 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cctttcaaggcacagtgagaaacttgcagttgcctttggacttatcactattgttccacc 594
Query: 2187 aattccaatcagaataatgaagaatttgcgcatatgtaatgattgccacacagtaatgaa 2246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aattccaatcagaataatgaagaatttgcgcatatgtaatgattgccacacagtaatgaa 534
Query: 2247 gttaatctccaaagcttttaatcgtgaaattgtggtacgggatcgtcatcgctttcatca 2306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gttaatctccaaagcttttaatcgtgaaattgtggtacgggatcgtcatcgctttcatca 474
Query: 2307 ctttaagcatggatcttgttcctgcatggatttttggtagc 2347
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ctttaagcatggatcttgttcctgcatggatttttggtagc 433