Miyakogusa Predicted Gene

Lj6g3v0856590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0856590.1 tr|A9RTR3|A9RTR3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_70439
,47.27,0.0000002,E set domains,Immunoglobulin E-set; CBM_48,Glycoside
hydrolase, family 13, N-terminal; 1,4-ALPHA-GLU,CUFF.58399.1
         (684 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80781 similar to UniRef100_A7P0L5 Cluster: Chromosome...   287   4e-77

>gnl|LJGI|TC80781 similar to UniRef100_A7P0L5 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 560

 Score =  287 bits (145), Expect = 4e-77
 Identities = 145/145 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacctcaaggagatggcttctgggtttgagctattgggtatgcatcgccatccagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atgaacctcaaggagatggcttctgggtttgagctattgggtatgcatcgccatccagaa 475

                                                                       
Query: 61  catcgggtggattatatggaatgggctccaggggctcgctactgtgcaattataggtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 catcgggtggattatatggaatgggctccaggggctcgctactgtgcaattataggtgat 535

                                    
Query: 121 atcaatgggtggtcacctacagaaa 145
           |||||||||||||||||||||||||
Sbjct: 536 atcaatgggtggtcacctacagaaa 560