Miyakogusa Predicted Gene

Lj6g3v0855550.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0855550.1 Non Chatacterized Hit- tr|K4B9W3|K4B9W3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.59,3e-19,seg,NULL; Stig1,Stigma-specific protein
Stig1,CUFF.58395.1
         (508 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80514 weakly similar to UniRef100_A9RS02 Cluster: Pre...   977   0.0  

>gnl|LJGI|TC80514 weakly similar to UniRef100_A9RS02 Cluster: Predicted protein; n=2;
           Physcomitrella patens|Rep: Predicted protein -
           Physcomitrella patens subsp. patens, partial (15%)
          Length = 776

 Score =  977 bits (493), Expect = 0.0
 Identities = 506/509 (99%), Gaps = 1/509 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggttccttaaagcgatattcgtcataacaataaccatggctttgtccattgcagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  atggggttccttaaagcgatattcgtcataacaataaccatggctttgtccattgcagca 134

                                                                       
Query: 61  ctcgtcacaatgaaaaacatcaccacaaccaaagaggaatcagcaaaaccattcctacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctcgtcacaatgaaaaacatcaccacaaccaaagaggaatcagcaaaaccattcctacct 194

                                                                       
Query: 121 tcagactcacaaccactaatggctcatgagaagaacacactccttccttcaaagagggtg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 195 tcagactcacaaccactaatggctcatgagaagaacacactccttccttcaaagggggtg 254

                                                                       
Query: 181 agtcggttcctcgctcaaaagccagcctatccttacccttatcctgatgcttccaattat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agtcggttcctcgctcaaaagccagcctatccttacccttatcctgatgcttccaattat 314

                                                                       
Query: 241 ccggtcgtccattgccagaaggacaacgagatttgcacctcattgagcaacagctattac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ccggtcgtccattgccagaaggacaacgagatttgcacctcattgagcaacagctattac 374

                                                                       
Query: 301 aactccactt-gctgcaacaacaagtgcatggatgtgagctatgacaagcataattgtgg 359
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aactccacttcgctgcaacaacaagtgcatggatgtgagctatgacaagcataattgtgg 434

                                                                       
Query: 360 tgcgtgcaagaagaagtgcaagtacaccaccacatgttgtagaggccaatgtgttgacat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tgcgtgcaagaagaagtgcaagtacaccaccacatgttgtagaggccaatgtgttgacat 494

                                                                       
Query: 420 caactttgacaagaggcattgtggcggttgcaacaaccgctgcgaaactggtcagtactg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 495 caactttgacaagaggcattgtggcggttgcaacaaccgctgcgaaactggtcagcactg 554

                                        
Query: 480 tacctatggaatgtgcggttacgcttgag 508
           |||||||||||||||||||||||||||||
Sbjct: 555 tacctatggaatgtgcggttacgcttgag 583