Miyakogusa Predicted Gene
- Lj6g3v0820220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0820220.1 tr|D7UPM9|D7UPM9_LOTJA SEC13 family protein
OS=Lotus japonicus GN=Sec13-like 1 PE=2
SV=1,100,0,WD_REPEATS_REGION,WD40-repeat-containing domain;
GPROTEINBRPT,G-protein beta WD-40 repeat; PTHR11024,CUFF.58377.1
(908 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62421 homologue to UniRef100_A7QLK1 Cluster: Chromoso... 1800 0.0
gnl|LJGI|TC77757 similar to UniRef100_A7QLK1 Cluster: Chromosome... 1041 0.0
gnl|LJGI|TC64458 similar to UniRef100_A7Q9B3 Cluster: Chromosome... 656 0.0
gnl|LJGI|TC60922 similar to UniRef100_A7QLK1 Cluster: Chromosome... 408 e-113
gnl|LJGI|GO024493 similar to UniRef100_A7QLK1 Cluster: Chromosom... 246 2e-64
gnl|LJGI|GO021327 similar to UniRef100_Q2PYY1 Cluster: Protein t... 80 3e-14
>gnl|LJGI|TC62421 homologue to UniRef100_A7QLK1 Cluster: Chromosome undetermined
scaffold_119, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_119, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 1284
Score = 1800 bits (908), Expect = 0.0
Identities = 908/908 (100%)
Strand = Plus / Plus
Query: 1 atgcctgctcagaaggttgaaacgggtcaccaagatactgtccatgatgttgcaatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgcctgctcagaaggttgaaacgggtcaccaagatactgtccatgatgttgcaatggat 176
Query: 61 tactatggtaagaggctagctacggcttcttcggaccacacaattaagataattggggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tactatggtaagaggctagctacggcttcttcggaccacacaattaagataattggggtg 236
Query: 121 agcaacacagcttctcagcatctagcaactctggccggtcaccaaggacctgtttggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agcaacacagcttctcagcatctagcaactctggccggtcaccaaggacctgtttggcag 296
Query: 181 gtcgcgtgggctcaccctaagtttggttctatgattgcttcttgttcctatgatggccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gtcgcgtgggctcaccctaagtttggttctatgattgcttcttgttcctatgatggccgc 356
Query: 241 gtcattatttggaaggagggtaatcagaacgagtggatccaagctcatgtgtttgatgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtcattatttggaaggagggtaatcagaacgagtggatccaagctcatgtgtttgatgac 416
Query: 301 cacaaatcatctgtgaattcagttgtttgggcacctcacgagttgggtctctgcctggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cacaaatcatctgtgaattcagttgtttgggcacctcacgagttgggtctctgcctggct 476
Query: 361 tgtggttcatctgatgggaatatatctgtgttcacagcaagagcagatggtggctgggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tgtggttcatctgatgggaatatatctgtgttcacagcaagagcagatggtggctgggac 536
Query: 421 acctcaaggattgatcaagcccacccagttggtgttacttctgtgtcttgggctccctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 acctcaaggattgatcaagcccacccagttggtgttacttctgtgtcttgggctccctcg 596
Query: 481 atggcacctggtgctcttgttggtgcagggttgcttgatcctgttcagaagctgtgctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atggcacctggtgctcttgttggtgcagggttgcttgatcctgttcagaagctgtgctct 656
Query: 541 ggtggttgtgataacactgtgaaggtgtggaagctcaccaatggaaactggaagatggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggtggttgtgataacactgtgaaggtgtggaagctcaccaatggaaactggaagatggac 716
Query: 601 tgcttccctgctcttcatatgcatacagattgggttcgagatgttgcttgggcacccaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgcttccctgctcttcatatgcatacagattgggttcgagatgttgcttgggcacccaac 776
Query: 661 ttgggacttcctaaatccactattgctagcgcatcacaggatggtaaagtcatcatatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ttgggacttcctaaatccactattgctagcgcatcacaggatggtaaagtcatcatatgg 836
Query: 721 actgtgggcaaagagggagatcagtgggaaggcaagattttgaatgatttcaagacccct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 actgtgggcaaagagggagatcagtgggaaggcaagattttgaatgatttcaagacccct 896
Query: 781 gtttggagggtctcatggtcattgactggaaacatactggctgtggctgatgggaacaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gtttggagggtctcatggtcattgactggaaacatactggctgtggctgatgggaacaac 956
Query: 841 aatgtgacattatggaaggaagcagtagatggggaatggcaacaggtgacaacagtggat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 aatgtgacattatggaaggaagcagtagatggggaatggcaacaggtgacaacagtggat 1016
Query: 901 ccgtagaa 908
||||||||
Sbjct: 1017 ccgtagaa 1024
>gnl|LJGI|TC77757 similar to UniRef100_A7QLK1 Cluster: Chromosome undetermined
scaffold_119, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_119,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (58%)
Length = 699
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Plus
Query: 1 atgcctgctcagaaggttgaaacgggtcaccaagatactgtccatgatgttgcaatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgcctgctcagaaggttgaaacgggtcaccaagatactgtccatgatgttgcaatggat 234
Query: 61 tactatggtaagaggctagctacggcttcttcggaccacacaattaagataattggggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tactatggtaagaggctagctacggcttcttcggaccacacaattaagataattggggtg 294
Query: 121 agcaacacagcttctcagcatctagcaactctggccggtcaccaaggacctgtttggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agcaacacagcttctcagcatctagcaactctggccggtcaccaaggacctgtttggcag 354
Query: 181 gtcgcgtgggctcaccctaagtttggttctatgattgcttcttgttcctatgatggccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtcgcgtgggctcaccctaagtttggttctatgattgcttcttgttcctatgatggccgc 414
Query: 241 gtcattatttggaaggagggtaatcagaacgagtggatccaagctcatgtgtttgatgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gtcattatttggaaggagggtaatcagaacgagtggatccaagctcatgtgtttgatgac 474
Query: 301 cacaaatcatctgtgaattcagttgtttgggcacctcacgagttgggtctctgcctggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cacaaatcatctgtgaattcagttgtttgggcacctcacgagttgggtctctgcctggct 534
Query: 361 tgtggttcatctgatgggaatatatctgtgttcacagcaagagcagatggtggctgggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgtggttcatctgatgggaatatatctgtgttcacagcaagagcagatggtggctgggac 594
Query: 421 acctcaaggattgatcaagcccacccagttggtgttacttctgtgtcttgggctccctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acctcaaggattgatcaagcccacccagttggtgttacttctgtgtcttgggctccctcg 654
Query: 481 atggcacctggtgctcttgttggtgcagggttgcttgatcctgtt 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 atggcacctggtgctcttgttggtgcagggttgcttgatcctgtt 699
>gnl|LJGI|TC64458 similar to UniRef100_A7Q9B3 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 1112
Score = 656 bits (331), Expect = 0.0
Identities = 647/751 (86%), Gaps = 1/751 (0%)
Strand = Plus / Plus
Query: 158 gtcaccaaggacctgtttggcaggtcgcgtgggctcaccctaagtttggttctatgattg 217
||||||||||||| || |||||||| || |||||||||||||| || ||| | | |||
Sbjct: 92 gtcaccaaggacccgtctggcaggttgcatgggctcaccctaaattcggtccc-tacttg 150
Query: 218 cttcttgttcctatgatggccgcgtcattatttggaaggagggtaatcagaacgagtgga 277
|||| ||||||||||| || || || ||| | ||||||||||| ||||| || || ||||
Sbjct: 151 cttcctgttcctatgacgggcgtgttattttgtggaaggagggcaatcaaaatgaatgga 210
Query: 278 tccaagctcatgtgtttgatgaccacaaatcatctgtgaattcagttgtttgggcacctc 337
|| || ||||| |||||||| ||||| ||||| ||||||||||| | |||||| ||||
Sbjct: 211 cacaggcccatgtctttgatgagcacaagtcatcagtgaattcagtggcttgggcgcctc 270
Query: 338 acgagttgggtctctgcctggcttgtggttcatctgatgggaatatatctgtgttcacag 397
| ||||| || || ||| ||||||||||||| || |||||||| || || || ||||| |
Sbjct: 271 atgagttaggcctttgcttggcttgtggttcgtcggatgggaacatctcggttttcactg 330
Query: 398 caagagcagatggtggctgggacacctcaaggattgatcaagcccacccagttggtgtta 457
|||| || |||| ||||||||| || || |||||||| ||||| ||||| |||||||| |
Sbjct: 331 caagggctgatgttggctgggatacttccaggattgaccaagctcaccctgttggtgtca 390
Query: 458 cttctgtgtcttgggctccctcgatggcacctggtgctcttgttggtgcagggttgcttg 517
|||||||||| ||||||||||||| || || |||||||||||| ||| || |||||||
Sbjct: 391 cttctgtgtcatgggctccctcgaccgctcccggtgctcttgttagtggtggattgcttg 450
Query: 518 atcctgttcagaagctgtgctctggtggttgtgataacactgtgaaggtgtggaagctca 577
||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 451 atcctgtgcagaagctttgctctggtggttgtgataatactgtgaaggtgtggaagctca 510
Query: 578 ccaatggaaactggaagatggactgcttccctgctcttcatatgcatacagattgggttc 637
|||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 511 acaatgggctctggaagatggactgcttccctgctcttcagatgcacacagattgggttc 570
Query: 638 gagatgttgcttgggcacccaacttgggacttcctaaatccactattgctagcgcatcac 697
|||||||||||||||||||||| |||||||||||||| || || ||||| || || || |
Sbjct: 571 gagatgttgcttgggcacccaatttgggacttcctaagtctacaattgcaagtgcttcgc 630
Query: 698 aggatggtaaagtcatcatatggactgtgggcaaagagggagatcagtgggaaggcaaga 757
|||||||||| || || ||||||||||||| ||| || |||||||| |||||||||| |
Sbjct: 631 aggatggtaaggtgattatatggactgtggccaaggaaggagatcaatgggaaggcaggg 690
Query: 758 ttttgaatgatttcaagacccctgtttggagggtctcatggtcattgactggaaacatac 817
||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||
Sbjct: 691 ttttgaatgatttcaagacccctgtttggagggcgtcctggtcactgactggaaacatat 750
Query: 818 tggctgtggctgatgggaacaacaatgtgacattatggaaggaagcagtagatggggaat 877
|||||||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| |
Sbjct: 751 tggctgtggctgatggaaacaacaatgttacattgtggaaggaagcagttgacggggact 810
Query: 878 ggcaacaggtgacaacagtggatccgtagaa 908
||||||||||||| || ||||| ||||||||
Sbjct: 811 ggcaacaggtgacgactgtggaaccgtagaa 841
>gnl|LJGI|TC60922 similar to UniRef100_A7QLK1 Cluster: Chromosome undetermined
scaffold_119, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_119,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (64%)
Length = 803
Score = 408 bits (206), Expect = e-113
Identities = 528/630 (83%), Gaps = 4/630 (0%)
Strand = Plus / Plus
Query: 1 atgcctgctcagaaggttgaaacgggtcaccaagatactgtccatgatgttgcaatggat 60
||||||| ||| ||||||||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 172 atgcctggtcaaaaggttgaaacaggtcatcaagacaccgttcatgatgttgcaatggat 231
Query: 61 tactatggtaagaggctagctacggcttcttcggaccacacaattaagataattggggtg 120
|||||||| || |||| ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 232 tactatggaaaacggctggctacagcctcgtctgatcacaccattaagataattggggtg 291
Query: 121 agcaacacagcttctcagcatctagcaactctggccggtcaccaaggacctgtttggcag 180
|||| | | || ||||||||| |||||||||| | |||||||||||||| || ||||||
Sbjct: 292 agcatcgctgcctctcagcatttagcaactctcactggtcaccaaggacccgtctggcag 351
Query: 181 gtcgcgtgggctcaccctaagtttggttctatgattgcttcttgttcctatgatggccgc 240
|| || |||||||||||||| || ||||| | ||||||| ||||||||||| || ||
Sbjct: 352 gttgcatgggctcaccctaaattcggttccctacttgcttcctgttcctatgacgggcgt 411
Query: 241 gtcattatttggaaggagggtaatcagaacgagtggatccaagctcatgtgtttgatgac 300
|| ||| | ||||||||||| |||| || || |||| || || ||||| ||||||||
Sbjct: 412 gttattttgtggaaggagggcgatcaaaatgaatggacacaggcccatgtctttgatgag 471
Query: 301 cacaaatcatctgtgaattcagttgtttgggcacctcacgagttgggtctctgcctggct 360
||||| ||||| ||||||||||| | |||||| ||||| ||||| || || ||| |||||
Sbjct: 472 cacaagtcatcagtgaattcagtggcttgggcgcctcatgagttaggcctttgcttggct 531
Query: 361 tgtggttcatctgatgggaatatatctgtgttcacagcaagagcagatggtggctgggac 420
|||||||| || |||||||| || || || ||||| ||||| || ||||||||||||||
Sbjct: 532 tgtggttcgtcggatgggaacatctcggttttcactgcaagggctgatggtggctgggat 591
Query: 421 acctcaaggattgatcaagcccacccagttggtgttacttctgtgtcttgggctccctcg 480
|| || |||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 592 acttccaggattgaccaagctcaccctgttggtgtcacttctgtgtcatgggctccctcg 651
Query: 481 atggcacctggtgctcttgttggtgcagggttgcttgatcctgttcagaagctgtgctct 540
| || || |||||||||||| ||| || |||||||||||||| |||||||| ||||||
Sbjct: 652 accgctcccggtgctcttgttagtggtggattgcttgatcctgtgcagaagctttgctct 711
Query: 541 ggtggttgtgataacactgtgaaggtgtggaagctcaccaatggaaactggaagatggac 600
|||||||||||| | |||||||| ||||||||||||| | |||| |||| ||||||||
Sbjct: 712 ggtggttgtgat-atactgtgaa-gtgtggaagctcaacgatgggctctgg-agatggac 768
Query: 601 tgcttccctgctcttcatatgcatacagat 630
||||| ||||||||||| ||||| ||||||
Sbjct: 769 tgctt-cctgctcttcagatgcacacagat 797
>gnl|LJGI|GO024493 similar to UniRef100_A7QLK1 Cluster: Chromosome undetermined
scaffold_119, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_119,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 660
Score = 246 bits (124), Expect = 2e-64
Identities = 361/440 (82%)
Strand = Plus / Plus
Query: 1 atgcctgctcagaaggttgaaacgggtcaccaagatactgtccatgatgttgcaatggat 60
||||||| ||| ||||||||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 182 atgcctggtcaaaaggttgaaacaggtcatcaagacaccgttcatgatgttgcaatggat 241
Query: 61 tactatggtaagaggctagctacggcttcttcggaccacacaattaagataattggggtg 120
|||||||| || |||| ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 242 tactatggaaaacggctggctacagcctcgtctgatcacaccattaagataattggggtg 301
Query: 121 agcaacacagcttctcagcatctagcaactctggccggtcaccaaggacctgtttggcag 180
|||| | | || ||||||||| |||||||||| | |||||||||||||| || ||||||
Sbjct: 302 agcatcgctgcctctcagcatttagcaactctcactggtcaccaaggacccgtctggcag 361
Query: 181 gtcgcgtgggctcaccctaagtttggttctatgattgcttcttgttcctatgatggccgc 240
|| || |||||||||||||| || ||||| | ||||||| ||||||||||| || ||
Sbjct: 362 gttgcatgggctcaccctaaattcggttccctacttgcttcctgttcctatgacgggcgt 421
Query: 241 gtcattatttggaaggagggtaatcagaacgagtggatccaagctcatgtgtttgatgac 300
|| ||| | ||||||||||| |||| || || |||| | || ||||| ||||||||
Sbjct: 422 gttattttgtggaaggagggcgatcaaaatgaatggacacgggcccatgtctttgatgag 481
Query: 301 cacaaatcatctgtgaattcagttgtttgggcacctcacgagttgggtctctgcctggct 360
||||| ||||| |||||||| || | |||||| ||||| ||||| || || ||| |||||
Sbjct: 482 cacaagtcatcagtgaattcggtggcttgggcgcctcatgagttaggcctttgcttggct 541
Query: 361 tgtggttcatctgatgggaatatatctgtgttcacagcaagagcagatggtggctgggac 420
|||||||| || |||||||| || || || ||||| ||||| || |||| |||||||||
Sbjct: 542 tgtggttcgtcggatgggaacatctcggttttcactgcaagggctgatgttggctgggat 601
Query: 421 acctcaaggattgatcaagc 440
|| || |||||||| |||||
Sbjct: 602 acttccaggattgaccaagc 621
>gnl|LJGI|GO021327 similar to UniRef100_Q2PYY1 Cluster: Protein transport SEC13-like
protein; n=1; Solanum tuberosum|Rep: Protein transport
SEC13-like protein - Solanum tuberosum (Potato), partial
(27%)
Length = 348
Score = 79.8 bits (40), Expect = 3e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 atgcctgctcagaaggttgaaacgggtcaccaagatactgtccatgatgttgcaatggat 60
||||||| ||| ||||||||||| ||||| ||||| || || ||||||||||||||||||
Sbjct: 103 atgcctggtcaaaaggttgaaacaggtcatcaagacaccgttcatgatgttgcaatggat 162
Query: 61 tactatgg 68
||||||||
Sbjct: 163 tactatgg 170
Score = 71.9 bits (36), Expect = 7e-12
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 215 ttgcttcttgttcctatgatggccgcgtcattatttggaaggagggtaatcagaacgagt 274
||||||| ||||||||||| || || || ||| | ||||||||||| |||| || || |
Sbjct: 222 ttgcttcctgttcctatgacgggcgtgttattttgtggaaggagggcgatcaaaatgaat 281
Query: 275 ggatccaagctcatgtgtttgatgaccacaaatcatctgtgaattcagttgtttgggcac 334
||| ||||| ||||| |||||||| ||||| ||||| ||||||||||| | |||||| |
Sbjct: 282 ggacacaagcccatgtctttgatgagcacaagtcatcagtgaattcagtggcttgggcgc 341
Query: 335 ctca 338
||||
Sbjct: 342 ctca 345