Miyakogusa Predicted Gene
- Lj6g3v0820210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0820210.1 Non Chatacterized Hit- tr|D7T831|D7T831_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,86.42,0,coiled-coil,NULL; Dynamin_N,Dynamin, GTPase domain; no
description,NULL; seg,NULL; P-loop containing,CUFF.58366.1
(1044 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82310 117 1e-25
gnl|LJGI|TC74175 similar to UniRef100_A7R0Z7 Cluster: Chromosome... 90 3e-17
gnl|LJGI|TC73550 60 3e-08
gnl|LJGI|TC63245 homologue to UniRef100_A7P0K3 Cluster: Chromoso... 60 3e-08
gnl|LJGI|FS318070 similar to UniRef100_A7P0K3 Cluster: Chromosom... 54 2e-06
>gnl|LJGI|TC82310
Length = 1200
Score = 117 bits (59), Expect = 1e-25
Identities = 125/147 (85%)
Strand = Plus / Plus
Query: 16 ggtcaatactcaactgggaaaacaacatttattaaacatatgcttaaaagtgattatcca 75
|||||||| || || || |||||||||||||| |||||| |||| ||| |||| ||||||
Sbjct: 603 ggtcaatattccacaggaaaaacaacatttataaaacatttgctaaaatgtgactatcca 662
Query: 76 ggagctcatattggacctgagccaacaacagataggtttgttgttgtcatgtctggacct 135
||||| ||| ||||||| || || ||||| ||||| |||||| |||| ||||| ||||||
Sbjct: 663 ggagcacatgttggaccagaacctacaaccgatagatttgttattgttatgtcaggacct 722
Query: 136 gatgagagaagtattcctggtaatact 162
|||||||| ||| ||||||| ||||||
Sbjct: 723 gatgagaggagtgttcctggaaatact 749
Score = 89.7 bits (45), Expect = 3e-17
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 388 tttgatcctcacaaacttgatatcagcgatgagttcaagcgtgtgatagcatccctacga 447
|||||||| || |||||||| ||||| |||||||| || || || || ||||| ||||
Sbjct: 975 tttgatccccataaacttgacatcagtgatgagtttaaacgagtaattgcatctctacat 1034
Query: 448 ggccatgatgataaaattcgagttgttttgaacaaggcagaccaagttgatactcaacaa 507
|| |||||||||| || || || |||||||||||||||||||||||| ||||||||||
Sbjct: 1035 ggtaatgatgataagatacgggtggttttgaacaaggcagaccaagttaatactcaacag 1094
Query: 508 ctaatgagggtatatgg 524
|| ||||| || |||||
Sbjct: 1095 cttatgagagtttatgg 1111
>gnl|LJGI|TC74175 similar to UniRef100_A7R0Z7 Cluster: Chromosome undetermined
scaffold_332, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_332,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 659
Score = 89.7 bits (45), Expect = 3e-17
Identities = 159/197 (80%)
Strand = Plus / Plus
Query: 718 aatgaatttgtaaaacgagcccgagctgcgaagatacatgcttgtatcatcagccatctg 777
|||||||| || ||||| || || |||| ||||| ||||| | ||| || ||||||||
Sbjct: 112 aatgaattcgttaaacgtgctagatctgcaaagattcatgcatatataattagccatctt 171
Query: 778 aaaaagaagatgcctgccatgatggggaaagctaaagctcagcaaaagcttattgataat 837
|| ||| |||||||||| || ||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 172 aagaaggagatgcctgcaataatgggcaaagccaaggctcaacaaaagcttatagataac 231
Query: 838 ttggaggatgaatttgcaaaggtacaaaaggagttccatctaccagctggagacttccca 897
| || | ||||||||||||||| |||| ||||| ||||||||||| || || || ||
Sbjct: 232 cttgatgttgaatttgcaaaggttcaaagggagtatcatctaccagccggtgattttccc 291
Query: 898 aatgttgatcacttcaa 914
||||| || ||||||||
Sbjct: 292 aatgtagagcacttcaa 308
>gnl|LJGI|TC73550
Length = 1238
Score = 60.0 bits (30), Expect = 3e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 77 gagctcatattggacctgagccaacaacagataggtttgttgttgt 122
|||| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 503 gagcacatattggacctgagcctacaactgatagatttgttgttgt 548
>gnl|LJGI|TC63245 homologue to UniRef100_A7P0K3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 686
Score = 60.0 bits (30), Expect = 3e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 77 gagctcatattggacctgagccaacaacagataggtttgttgttgt 122
|||| ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 509 gagcacatattggacctgagcctacaactgatagatttgttgttgt 554
>gnl|LJGI|FS318070 similar to UniRef100_A7P0K3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 723
Score = 54.0 bits (27), Expect = 2e-06
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 31 gggaaaacaacatttattaaacatatgcttaaaagtgattatccaggagctcatattgga 90
|||||||||||||| || |||||| | || | | ||||||||||||| || || |||||
Sbjct: 633 gggaaaacaacattcataaaacatttactaagatgtgattatccaggggcacacattggg 692
Query: 91 cctgagccaacaacagataggtttgttgttg 121
|| ||||| ||||| || || ||||||||||
Sbjct: 693 ccagagcctacaactgacagatttgttgttg 723