Miyakogusa Predicted Gene
- Lj6g3v0820170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0820170.1 tr|Q9FLP2|Q9FLP2_ARATH At5g55210 OS=Arabidopsis
thaliana GN=At5g55210 PE=2 SV=1,38.86,4e-19,seg,NULL,CUFF.58362.1
(528 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71752 similar to UniRef100_A7P0J8 Cluster: Chromosome... 718 0.0
gnl|LJGI|TC82470 119 2e-26
>gnl|LJGI|TC71752 similar to UniRef100_A7P0J8 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 916
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 167 cttcctctcgcctcctcctccgtcgctggacccctatcaccgcctcctccgccgccgctg 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cttcctctcgcctcctcctccgtcgctggacccctatcaccgcctcctccgccgccgctg 325
Query: 227 aagagtcccaaggcggttccgacaacgtctcagacgagccacccaaacggaagttccgtt 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aagagtcccaaggcggttccgacaacgtctcagacgagccacccaaacggaagttccgtt 385
Query: 287 acactcctattgctgtgctagaagaacagaaaaaaggggttgaaaagagtgaacatgaac 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acactcctattgctgtgctagaagaacagaaaaaaggggttgaaaagagtgaacatgaac 445
Query: 347 ccacaagtgagagtgacaaacttacagctaaacagataaatgcgactcaagaggtgcatg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccacaagtgagagtgacaaacttacagctaaacagataaatgcgactcaagaggtgcatg 505
Query: 407 ggaagttgaacatgaatgaaatttctgaggagtccaaggattcaaacatgagcaagttgg 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggaagttgaacatgaatgaaatttctgaggagtccaaggattcaaacatgagcaagttgg 565
Query: 467 atcttggtttcgacctccaaggcaacaatggtgaaaacagtccgaattatgatgattaga 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atcttggtttcgacctccaaggcaacaatggtgaaaacagtccgaattatgatgattaga 625
Query: 527 tg 528
||
Sbjct: 626 tg 627
Score = 242 bits (122), Expect = 2e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 atggaggccgtgggttcgaccaggctaggccgcgccacctcccgctacggcgcacccgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggaggccgtgggttcgaccaggctaggccgcgccacctcccgctacggcgcacccgcc 159
Query: 61 gtgttcagtggccccgtcaggaagtggaagaagaagtggatccacgtcaccccttcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gtgttcagtggccccgtcaggaagtggaagaagaagtggatccacgtcaccccttcatcc 219
Query: 121 tt 122
||
Sbjct: 220 tt 221
>gnl|LJGI|TC82470
Length = 489
Score = 119 bits (60), Expect = 2e-26
Identities = 67/68 (98%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 462 gttggatcttggtttcgacctccaaggcaacaa-tggtgaaaacagtccgaattatgatg 520
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 gttggatcttggtttcgacctccaaggcaacaactggtgaaaacagtccgaattatgatg 64
Query: 521 attagatg 528
||||||||
Sbjct: 65 attagatg 72