Miyakogusa Predicted Gene

Lj6g3v0814380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0814380.1 Non Chatacterized Hit- tr|I1JJF8|I1JJF8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6047
PE=,90.43,0,Pirin_C,Pirin, C-terminal domain; Pirin,Pirin, N-terminal
domain; SUBFAMILY NOT NAMED,NULL; PIRIN-RE,CUFF.58332.1
         (900 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58183 similar to UniRef100_A7Q9P0 Cluster: Chromosome...    60   3e-08
gnl|LJGI|TC80956 similar to UniRef100_A7Q9P0 Cluster: Chromosome...    58   1e-07

>gnl|LJGI|TC58183 similar to UniRef100_A7Q9P0 Cluster: Chromosome chr5 scaffold_67,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_67, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 1256

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 120/150 (80%)
 Strand = Plus / Plus

                                                                       
Query: 175 cctgatcatccacatagaggctttgagacggtcacatacatgttacagggagctgtaaca 234
           |||||||||||||| ||||| |||||||| ||||| |||||| || |||||||  |||| 
Sbjct: 295 cctgatcatccacacagaggttttgagaccgtcacctacatgctagagggagccataact 354

                                                                       
Query: 235 catgaagactttgaaggacataagggaacaatcgaagccggtgacttgcagtggatgact 294
           ||  |||| ||||  ||||| ||||| ||||| |   | |||||  | ||||||||||| 
Sbjct: 355 caccaagattttgctggacacaagggtacaatagggcctggtgatgttcagtggatgacc 414

                                         
Query: 295 gcagggagagggatagttcactcagaaatg 324
           || || || || || |||||||||||||||
Sbjct: 415 gcgggcaggggaattgttcactcagaaatg 444


>gnl|LJGI|TC80956 similar to UniRef100_A7Q9P0 Cluster: Chromosome chr5 scaffold_67,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_67, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 416

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 175 cctgatcatccacatagaggctttgagacggtcacatacatgttacagggagc 227
           |||||||||||||| ||||| |||||||| ||||| |||||| || |||||||
Sbjct: 346 cctgatcatccacacagaggttttgagaccgtcacctacatgctagagggagc 398