Miyakogusa Predicted Gene
- Lj6g3v0814370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0814370.1 Non Chatacterized Hit- tr|D8LKL2|D8LKL2_ECTSI
Putative: Beta-tubulin folding cofactor A
OS=Ectocarpu,47.52,7e-17,Q547H3_ARATH_Q547H3;,Tubulin binding cofactor
A; no description,NULL; TBCA,Tubulin binding cofactor ,CUFF.58305.1
(345 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65447 similar to UniRef100_A5CFZ2 Cluster: Tubulin fo... 684 0.0
gnl|LJGI|TC64731 similar to UniRef100_A5CFZ2 Cluster: Tubulin fo... 684 0.0
gnl|LJGI|TC70885 homologue to UniRef100_Q6NLR2 Cluster: At1g6465... 448 e-125
>gnl|LJGI|TC65447 similar to UniRef100_A5CFZ2 Cluster: Tubulin folding cofactor A;
n=1; Hordeum vulgare subsp. vulgare|Rep: Tubulin folding
cofactor A - Hordeum vulgare var. distichum (Two-rowed
barley), partial (77%)
Length = 717
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 1 atggctactgtgagaagcctgaagatcaagacaagcacatgcaaacgcattgtgaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggctactgtgagaagcctgaagatcaagacaagcacatgcaaacgcattgtgaaggag 122
Query: 61 ctgcattcttatgagaaggaagttgaaagcgaagctgcgaaaaccgctgacatgaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctgcattcttatgagaaggaagttgaaagcgaagctgcgaaaaccgctgacatgaagaac 182
Query: 121 agaggagctgacccttatgatctcaaacagcaggaaaatgtgctggctgagtctaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agaggagctgacccttatgatctcaaacagcaggaaaatgtgctggctgagtctaggatg 242
Query: 181 atgattcctgactgccgcaagcgcctggaggtcgctttggaagacttgaaaggaatattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgattcctgactgccgcaagcgcctggaggtcgctttggaagacttgaaaggaatattg 302
Query: 241 gctgaaatggaggagtcagatgagaaggaatgtcctgaagttgatgaagctaaaaccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gctgaaatggaggagtcagatgagaaggaatgtcctgaagttgatgaagctaaaaccacc 362
Query: 301 ctctcagaagttgaaaaagtacttgaaacaatagaagtttagcaa 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctctcagaagttgaaaaagtacttgaaacaatagaagtttagcaa 407
>gnl|LJGI|TC64731 similar to UniRef100_A5CFZ2 Cluster: Tubulin folding cofactor A;
n=1; Hordeum vulgare subsp. vulgare|Rep: Tubulin folding
cofactor A - Hordeum vulgare var. distichum (Two-rowed
barley), partial (77%)
Length = 676
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 1 atggctactgtgagaagcctgaagatcaagacaagcacatgcaaacgcattgtgaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggctactgtgagaagcctgaagatcaagacaagcacatgcaaacgcattgtgaaggag 147
Query: 61 ctgcattcttatgagaaggaagttgaaagcgaagctgcgaaaaccgctgacatgaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ctgcattcttatgagaaggaagttgaaagcgaagctgcgaaaaccgctgacatgaagaac 207
Query: 121 agaggagctgacccttatgatctcaaacagcaggaaaatgtgctggctgagtctaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 agaggagctgacccttatgatctcaaacagcaggaaaatgtgctggctgagtctaggatg 267
Query: 181 atgattcctgactgccgcaagcgcctggaggtcgctttggaagacttgaaaggaatattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atgattcctgactgccgcaagcgcctggaggtcgctttggaagacttgaaaggaatattg 327
Query: 241 gctgaaatggaggagtcagatgagaaggaatgtcctgaagttgatgaagctaaaaccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gctgaaatggaggagtcagatgagaaggaatgtcctgaagttgatgaagctaaaaccacc 387
Query: 301 ctctcagaagttgaaaaagtacttgaaacaatagaagtttagcaa 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctctcagaagttgaaaaagtacttgaaacaatagaagtttagcaa 432
>gnl|LJGI|TC70885 homologue to UniRef100_Q6NLR2 Cluster: At1g64650; n=1; Arabidopsis
thaliana|Rep: At1g64650 - Arabidopsis thaliana
(Mouse-ear cress), partial (30%)
Length = 782
Score = 448 bits (226), Expect = e-125
Identities = 226/226 (100%)
Strand = Plus / Minus
Query: 1 atggctactgtgagaagcctgaagatcaagacaagcacatgcaaacgcattgtgaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atggctactgtgagaagcctgaagatcaagacaagcacatgcaaacgcattgtgaaggag 170
Query: 61 ctgcattcttatgagaaggaagttgaaagcgaagctgcgaaaaccgctgacatgaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ctgcattcttatgagaaggaagttgaaagcgaagctgcgaaaaccgctgacatgaagaac 110
Query: 121 agaggagctgacccttatgatctcaaacagcaggaaaatgtgctggctgagtctaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 agaggagctgacccttatgatctcaaacagcaggaaaatgtgctggctgagtctaggatg 50
Query: 181 atgattcctgactgccgcaagcgcctggaggtcgctttggaagact 226
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atgattcctgactgccgcaagcgcctggaggtcgctttggaagact 4