Miyakogusa Predicted Gene
- Lj6g3v0802140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0802140.1 Non Chatacterized Hit- tr|I1KYG8|I1KYG8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48655
PE,82.23,0,GRAS,Transcription factor GRAS; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.58279.1
(1643 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69040 similar to UniRef100_A7P0E9 Cluster: Chromosome... 1053 0.0
gnl|LJGI|TC80832 similar to UniRef100_A7P0E9 Cluster: Chromosome... 882 0.0
gnl|LJGI|AV414168 similar to UniRef100_A7P0E9 Cluster: Chromosom... 412 e-114
gnl|LJGI|TC71525 similar to UniRef100_A7P0E9 Cluster: Chromosome... 351 9e-96
gnl|LJGI|TC67111 similar to UniRef100_Q0SNN8 Cluster: Flagellar ... 72 1e-11
gnl|LJGI|AV781251 68 2e-10
gnl|LJGI|TC81247 64 3e-09
gnl|LJGI|TC62299 similar to UniRef100_A7P114 Cluster: Chromosome... 60 5e-08
gnl|LJGI|TC78496 homologue to UniRef100_A7Q341 Cluster: Chromoso... 54 3e-06
>gnl|LJGI|TC69040 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 806
Score = 1053 bits (531), Expect = 0.0
Identities = 531/531 (100%)
Strand = Plus / Plus
Query: 1113 ttatgaagctgtggctgtgaactttgccattatgctgcaccatgtaccagatgaaagcgt 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatgaagctgtggctgtgaactttgccattatgctgcaccatgtaccagatgaaagcgt 60
Query: 1173 gagcagccataatcaccgggaccggttgttgaaattggctaagtgtttgtctccaaaggt 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagcagccataatcaccgggaccggttgttgaaattggctaagtgtttgtctccaaaggt 120
Query: 1233 agtcactctggtggagcaggaattcaatactaacaacgctccgttcttgcagcgtttcgt 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtcactctggtggagcaggaattcaatactaacaacgctccgttcttgcagcgtttcgt 180
Query: 1293 tgagacaatgaactactaccaggctgtttttgaatcaattgatgttgttcttccaaggga 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagacaatgaactactaccaggctgtttttgaatcaattgatgttgttcttccaaggga 240
Query: 1353 gcacaaggagaggatcaatgtggaacagcattgtttggctcgcgaagttgtcaacttagt 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcacaaggagaggatcaatgtggaacagcattgtttggctcgcgaagttgtcaacttagt 300
Query: 1413 agcatgtgaaggggcagagagagtggaacgtcatgaacttctgaataagtggagaatgcg 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcatgtgaaggggcagagagagtggaacgtcatgaacttctgaataagtggagaatgcg 360
Query: 1473 gttcgccagtgctggatttacaccttatccattgaactcctatataaattcttcaatcaa 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttcgccagtgctggatttacaccttatccattgaactcctatataaattcttcaatcaa 420
Query: 1533 ggatcttctggagagctaccgcggacattacaccttagaagagagagatggtgcactgtt 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggatcttctggagagctaccgcggacattacaccttagaagagagagatggtgcactgtt 480
Query: 1593 tcttggttggatgaatcaagttcttgttgcctcttgtgcttggagatgaaa 1643
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcttggttggatgaatcaagttcttgttgcctcttgtgcttggagatgaaa 531
>gnl|LJGI|TC80832 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 710
Score = 882 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Plus
Query: 1 atgcagacatctcaaaagcatgaaatatcttacggctctggcaggttttatgtcgagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgcagacatctcaaaagcatgaaatatcttacggctctggcaggttttatgtcgagcct 325
Query: 61 gtgcagaatctggaatcatattgtttaccatcaagtgagaacctagataattactcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtgcagaatctggaatcatattgtttaccatcaagtgagaacctagataattactcttcc 385
Query: 121 tctgataacagcacccaaataacttacccttcagtccagactttagaacaatattgcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctgataacagcacccaaataacttacccttcagtccagactttagaacaatattgcacc 445
Query: 181 catgaatctgcttcaacaagcaacagtttcccttaccaaaattctccatctaatgtcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 catgaatctgcttcaacaagcaacagtttcccttaccaaaattctccatctaatgtcagt 505
Query: 241 ttttcatctgacaacagcccagtgtcaaagcaagagtcaaactcatatgtgtttcggccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttttcatctgacaacagcccagtgtcaaagcaagagtcaaactcatatgtgtttcggccg 565
Query: 301 cagcaatctgttgaaatttttaacggcgcacctgaggatgattattactcggcacaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cagcaatctgttgaaatttttaacggcgcacctgaggatgattattactcggcacaagac 625
Query: 361 tttgatgacctgaggcataagataagagagctggaaaccgcaatgctgggaccgaataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tttgatgacctgaggcataagataagagagctggaaaccgcaatgctgggaccgaataca 685
Query: 421 gatatgctagacacatatgatgctg 445
|||||||||||||||||||||||||
Sbjct: 686 gatatgctagacacatatgatgctg 710
>gnl|LJGI|AV414168 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 208
Score = 412 bits (208), Expect = e-114
Identities = 208/208 (100%)
Strand = Plus / Plus
Query: 787 ttcaagtttggatatatgtcagcaaatggagcaattgctgaagctatgaaggaggaaaga 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaagtttggatatatgtcagcaaatggagcaattgctgaagctatgaaggaggaaaga 60
Query: 847 gaagtccacataattgactttcagattagccagggaacacagtgggtgagcctaatccaa 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtccacataattgactttcagattagccagggaacacagtgggtgagcctaatccaa 120
Query: 907 gctcttgctcaccgacccggaggaccgccaaaggtgagaataaccggtgttgatgacaca 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctcttgctcaccgacccggaggaccgccaaaggtgagaataaccggtgttgatgacaca 180
Query: 967 ttttcatcttatgcccggggagggggac 994
||||||||||||||||||||||||||||
Sbjct: 181 ttttcatcttatgcccggggagggggac 208
>gnl|LJGI|TC71525 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 906
Score = 351 bits (177), Expect = 9e-96
Identities = 393/465 (84%)
Strand = Plus / Plus
Query: 1177 agccataatcaccgggaccggttgttgaaattggctaagtgtttgtctccaaaggtagtc 1236
||||| |||||||| |||||||||||| |||||| ||||| |||||||| ||||||||
Sbjct: 176 agccagaatcaccgcaaccggttgttgagattggcaaagtgcttgtctcctaaggtagtg 235
Query: 1237 actctggtggagcaggaattcaatactaacaacgctccgttcttgcagcgtttcgttgag 1296
|| ||||| ||||| |||| || || || ||| || ||||||| ||||||||| |||
Sbjct: 236 acactggttgagcaagaatcaaacaccaataacctcccattcttgccgcgtttcgtcgag 295
Query: 1297 acaatgaactactaccaggctgtttttgaatcaattgatgttgttcttccaagggagcac 1356
||||||||||||||| ||| |||||||| |||||||||| | |||||||||||||||
Sbjct: 296 acaatgaactactacttggcagtttttgagtcaattgatgccgctcttccaagggagcat 355
Query: 1357 aaggagaggatcaatgtggaacagcattgtttggctcgcgaagttgtcaacttagtagca 1416
|| || ||||||||||||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct: 356 aaagaaaggatcaatgtggaacaacattgcttggcacgagaagttgtcaacttagtggca 415
Query: 1417 tgtgaaggggcagagagagtggaacgtcatgaacttctgaataagtggagaatgcggttc 1476
|||||||| ||||| ||||||||||| ||||| |||||||| ||||||||| || |||
Sbjct: 416 tgtgaaggagcagaaagagtggaacgccatgagcttctgaagaagtggagatcacgtttc 475
Query: 1477 gccagtgctggatttacaccttatccattgaactcctatataaattcttcaatcaaggat 1536
| | |||||||| ||||| |||||||||| ||||| ||| |||| |||||| ||| ||
Sbjct: 476 gaaatggctggattcacaccatatccattgagctcctttattaattgttcaataaagaat 535
Query: 1537 cttctggagagctaccgcggacattacaccttagaagagagagatggtgcactgtttctt 1596
|||| ||| ||||||| ||||||||||| ||||||||||||||||||| || | |||
Sbjct: 536 cttcaggaaagctaccaaggacattacactctagaagagagagatggtgctctatgtcta 595
Query: 1597 ggttggatgaatcaagttcttgttgcctcttgtgcttggagatga 1641
|| |||| |||||| ||||||||| ||||||||||||||||||||
Sbjct: 596 gggtggaggaatcatgttcttgtttcctcttgtgcttggagatga 640
>gnl|LJGI|TC67111 similar to UniRef100_Q0SNN8 Cluster: Flagellar biosynthetic protein
fliR; n=1; Borrelia afzelii PKo|Rep: Flagellar
biosynthetic protein fliR - Borrelia afzelii (strain
PKo), partial (7%)
Length = 673
Score = 71.9 bits (36), Expect = 1e-11
Identities = 92/110 (83%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 162 tttagaacaatattgcacccatgaatctgcttcaacaagcaacagtttcccttaccaaaa 221
||||||||||||||| |||| ||||||| |||| || |||||||| ||| |||||
Sbjct: 461 tttagaacaatattggacccctgaatct---tcaataaataacagttttcctggtcaaaa 517
Query: 222 ttctccatctaatgtcagtttttcatctgacaacagcccagtgtcaaagc 271
||||||||||| ||||| ||||||| |||| || |||||||| |||||||
Sbjct: 518 ttctccatctactgtcattttttcacctgaaaatagcccagtctcaaagc 567
>gnl|LJGI|AV781251
Length = 377
Score = 67.9 bits (34), Expect = 2e-10
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 1573 gagagagatggtgcactgtttcttggttggatgaatca-agttcttgttgcctcttgtgc 1631
|||||||||||||| || | | |||| |||| |||||| |||||||||| ||||||||||
Sbjct: 377 gagagagatggtgctctatgttttgggtggaggaatcatagttcttgtttcctcttgtgc 318
Query: 1632 ttggagatga 1641
||||||||||
Sbjct: 317 ttggagatga 308
>gnl|LJGI|TC81247
Length = 905
Score = 63.9 bits (32), Expect = 3e-09
Identities = 91/110 (82%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 162 tttagaacaatattgcacccatgaatctgcttcaacaagcaacagtttcccttaccaaaa 221
||||||||||||||| |||| ||||||| |||| || |||||||| ||| |||||
Sbjct: 492 tttagaacaatattggacccctgaatct---tcaataaataacagttttcctggtcaaaa 548
Query: 222 ttctccatctaatgtcagtttttcatctgacaacagcccagtgtcaaagc 271
||||||||||| ||||| |||||| |||| || |||||||| |||||||
Sbjct: 549 ttctccatctactgtcatcttttcacctgaaaatagcccagtctcaaagc 598
>gnl|LJGI|TC62299 similar to UniRef100_A7P114 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 688
Score = 60.0 bits (30), Expect = 5e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 1356 caaggagaggatcaatgtggaacagcattgtttggctcgcgaagttgtcaacttagtagc 1415
||||||||||||||||||||| ||||||||| | || ||||| |||||||| | || ||
Sbjct: 76 caaggagaggatcaatgtggagcagcattgtcttgcgcgcgacattgtcaacatcgtcgc 135
Query: 1416 atgtgaaggg 1425
|||||||||
Sbjct: 136 ttgtgaaggg 145
>gnl|LJGI|TC78496 homologue to UniRef100_A7Q341 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 604
Score = 54.0 bits (27), Expect = 3e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1321 tttgaatcaattgatgttgttcttccaagggagcacaaggagaggatcaatgtggaacag 1380
||||||||||| |||||| ||| || || ||||| || ||||| ||||||||||| |||
Sbjct: 18 tttgaatcaatagatgttactctccctagagagcataaagagagaatcaatgtggagcag 77
Query: 1381 cattgtttggc 1391
||||| |||||
Sbjct: 78 cattgcttggc 88