Miyakogusa Predicted Gene

Lj6g3v0792060.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0792060.1 Non Chatacterized Hit- tr|F6HA33|F6HA33_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,26.84,0.093,L
domain-like,NULL; no description,NULL; seg,NULL; LRR_8,NULL; CG2471-PA
(LP11415P),NULL; LEUCINE-RI,CUFF.58271.1
         (1241 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS352602 weakly similar to UniRef100_Q2KIN3 Cluster: Un...   549   e-155
gnl|LJGI|BP064237 weakly similar to UniRef100_Q2KIN3 Cluster: Un...    82   9e-15
gnl|LJGI|GO015182                                                      52   8e-06

>gnl|LJGI|FS352602 weakly similar to UniRef100_Q2KIN3 Cluster: Uncharacterized protein
            C14orf28 homolog; n=1; Bos taurus|Rep: Uncharacterized
            protein C14orf28 homolog - Bos taurus (Bovine), partial
            (8%)
          Length = 558

 Score =  549 bits (277), Expect = e-155
 Identities = 280/281 (99%)
 Strand = Plus / Minus

                                                                        
Query: 961  ttgcctaaattgagttccatccttattgatagaggagcactgccttctctaaaaatgctt 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558  ttgcctaaattgagttccatccttattgatagaggagcactgccttctctaaaaatgctt 499

                                                                        
Query: 1021 gagttaacgtctctccccgaacttcagaagataccctctgtcatccagcacttggacaaa 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498  gagttaacgtctctccccgaacttcagaagataccctctgtcatccagcacttggacaaa 439

                                                                        
Query: 1081 cttgaagttctccaacttaattatatgaatgtttacccgagctcttttccaagtggagga 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438  cttgaagttctccaacttaattatatgaatgtttacccgagctcttttccaagtggagga 379

                                                                        
Query: 1141 ccaggcatcgccatgaagcaggtggtccaagtaaaaattcgcagttatgatcgctcacgt 1200
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378  ccaagcatcgccatgaagcaggtggtccaagtaaaaattcgcagttatgatcgctcacgt 319

                                                     
Query: 1201 ggatcctataccgaggtcattccttactcaaggagttaaaa 1241
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 318  ggatcctataccgaggtcattccttactcaaggagttaaaa 278


>gnl|LJGI|BP064237 weakly similar to UniRef100_Q2KIN3 Cluster: Uncharacterized protein
            C14orf28 homolog; n=1; Bos taurus|Rep: Uncharacterized
            protein C14orf28 homolog - Bos taurus (Bovine), partial
            (8%)
          Length = 515

 Score = 81.8 bits (41), Expect = 9e-15
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                     
Query: 1201 ggatcctataccgaggtcattccttactcaaggagttaaaa 1241
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 515  ggatcctataccgaggtcattccttactcaaggagttaaaa 475


>gnl|LJGI|GO015182 
          Length = 814

 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 890 catatgaaggtgaaactttgtattttcatgatggggggtttc 931
           ||||||| |||||||||||| ||||||  |||||||||||||
Sbjct: 583 catatgatggtgaaactttgcattttccagatggggggtttc 542