Miyakogusa Predicted Gene

Lj6g3v0781000.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0781000.1 Non Chatacterized Hit- tr|I1N0C1|I1N0C1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,83.97,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; ABC transporter
transmembrane region,ABC ,CUFF.58291.1
         (1902 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS349782 similar to UniRef100_A7Q947 Cluster: Chromosom...   204   1e-51

>gnl|LJGI|FS349782 similar to UniRef100_A7Q947 Cluster: Chromosome chr19 scaffold_66,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_66, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 584

 Score =  204 bits (103), Expect = 1e-51
 Identities = 286/347 (82%)
 Strand = Plus / Minus

                                                                        
Query: 1042 tttgttgctgtggttacttttggggcttgtgttcttataggcatcccacttgaatcaggg 1101
            |||||| | |||| ||||||||   ||||| | ||| |||| ||||| || |||||||||
Sbjct: 502  tttgtttccgtggctacttttgttacttgtatgcttgtagggatccctctcgaatcaggg 443

                                                                        
Query: 1102 aaggtcttatctgctcttgcaacattcagaattcttcaaatgccaatctatagtcttcct 1161
            ||| |||||||||| |||||||||||| | |||||||||  ||| || |||| |||||| 
Sbjct: 442  aagatcttatctgcacttgcaacattccggattcttcaagcgcctatttataatcttcca 383

                                                                        
Query: 1162 gacacaatttcaatgattgcacaaactaaggtttcccttgataggattgcatcgtatctt 1221
            ||||||||||||||||| |||||||| || ||||| ||||| |||||||||||||  |||
Sbjct: 382  gacacaatttcaatgatagcacaaaccaaagtttctcttgacaggattgcatcgttcctt 323

                                                                        
Query: 1222 cgcctagatgagttacagaatgatgtggttgagaagcttccaagaggtagttctgatgta 1281
            ||||||||||| || | ||  ||||| || || ||||||||  | ||||||| ||||  |
Sbjct: 322  cgcctagatgacttgccgaccgatgttgtagaaaagcttcctcggggtagttttgataca 263

                                                                        
Query: 1282 gcagttgaatttgtagatggaaatttctcttgggatttatcttctgttaatccaacattg 1341
            ||| ||||| |||| ||||| ||||| ||||||||||| |||||   ||||||||| |||
Sbjct: 262  gcaattgaagttgtggatgggaatttttcttgggatttttcttcccctaatccaaccttg 203

                                                           
Query: 1342 aaagacataaatcttagagtttttcatggtatgaaggttgctgtttg 1388
             || | |||||||| ||||||| |||||| |||| ||||||| ||||
Sbjct: 202  caaaatataaatctcagagtttctcatggcatgagggttgctatttg 156