Miyakogusa Predicted Gene

Lj6g3v0775980.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0775980.1 Non Chatacterized Hit- tr|I3S9B7|I3S9B7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.98,0,RIBOSOMALS10,Ribosomal protein S10;
Ribosomal_S10,Ribosomal protein S10; RIBOSOMAL_S10,Ribosomal
pro,gene.g64761.t1.1
         (591 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57707 homologue to UniRef100_A1YMX4 Cluster: 30S ribo...  1172   0.0  
gnl|LJGI|CB829106 homologue to UniRef100_A1YMX4 Cluster: 30S rib...   234   5e-61

>gnl|LJGI|TC57707 homologue to UniRef100_A1YMX4 Cluster: 30S ribosomal protein
           S10-like; n=1; Brassica rapa|Rep: 30S ribosomal protein
           S10-like - Brassica campestris (Field mustard), partial
           (59%)
          Length = 922

 Score = 1172 bits (591), Expect = 0.0
 Identities = 591/591 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcggtctcttctttctctgcagcaattgtgccttctctttccctctccaattcttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  atggcggtctcttctttctctgcagcaattgtgccttctctttccctctccaattcttca 96

                                                                       
Query: 61  cccaagccaaagttcccatctctatcttttctctctggtaacaccttgaggctcacaacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  cccaagccaaagttcccatctctatcttttctctctggtaacaccttgaggctcacaacc 156

                                                                       
Query: 121 ctaaaacctctacactcatcaactgtgctaaaagctgctccagaagtgttggattccaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctaaaacctctacactcatcaactgtgctaaaagctgctccagaagtgttggattccaca 216

                                                                       
Query: 181 gaaacccttgaagatgactctgaatcaagcacctttcaggttggtgacttggggactcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaaacccttgaagatgactctgaatcaagcacctttcaggttggtgacttggggactcct 276

                                                                       
Query: 241 agcacttcgtctattagcattgggggtgatgcagatgcgatggcaccgaagcagaaaatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 agcacttcgtctattagcattgggggtgatgcagatgcgatggcaccgaagcagaaaatc 336

                                                                       
Query: 301 agaatcaagcttagatcttactgggtgcctttgatagaggattcctgcaaacagatattg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agaatcaagcttagatcttactgggtgcctttgatagaggattcctgcaaacagatattg 396

                                                                       
Query: 361 gatgcagcaaggaataccaatgcaaaaacaatgggtcctgtgccattaccaacaaagaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gatgcagcaaggaataccaatgcaaaaacaatgggtcctgtgccattaccaacaaagaaa 456

                                                                       
Query: 421 cggatttactgtgttctgaaatcccctcacgttcacaaggatgctcggttccatttcgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cggatttactgtgttctgaaatcccctcacgttcacaaggatgctcggttccatttcgag 516

                                                                       
Query: 481 atcagaactcatcagcgcctcattgatattctatatcctacagctcaaactatagattcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atcagaactcatcagcgcctcattgatattctatatcctacagctcaaactatagattcc 576

                                                              
Query: 541 ttgatgcaacttgatcttcctgctggtgttgatgtggaggtcaagctctag 591
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttgatgcaacttgatcttcctgctggtgttgatgtggaggtcaagctctag 627


>gnl|LJGI|CB829106 homologue to UniRef100_A1YMX4 Cluster: 30S ribosomal protein
           S10-like; n=1; Brassica rapa|Rep: 30S ribosomal protein
           S10-like - Brassica campestris (Field mustard), partial
           (21%)
          Length = 553

 Score =  234 bits (118), Expect = 5e-61
 Identities = 121/122 (99%)
 Strand = Plus / Plus

                                                                       
Query: 279 gatggcaccgaagcagaaaatcagaatcaagcttagatcttactgggtgcctttgataga 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gatggcaccgaagcagaaaatcagaatcaagcttagatcttactgggtgcctttgataga 491

                                                                       
Query: 339 ggattcctgcaaacagatattggatgcagcaaggaataccaatgcaaaaacaatgggtcc 398
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 492 ggattcctgcaaacagatattggaagcagcaaggaataccaatgcaaaaacaatgggtcc 551

             
Query: 399 tg 400
           ||
Sbjct: 552 tg 553