Miyakogusa Predicted Gene

Lj6g3v0774920.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0774920.2 Non Chatacterized Hit- tr|B9SAJ5|B9SAJ5_RICCO
Putative uncharacterized protein OS=Ricinus communis G,52.78,3e-17,Ran
BP2/NZF zinc finger-like,NULL; ZF_RANBP2_2,Zinc finger, RanBP2-type;
WLM,WLM; ZF_RANBP2_1,Zinc f,CUFF.58231.2
         (1242 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74577 weakly similar to UniRef100_A7Q959 Cluster: Chr...  1269   0.0  

>gnl|LJGI|TC74577 weakly similar to UniRef100_A7Q959 Cluster: Chromosome chr19
            scaffold_66, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (24%)
          Length = 793

 Score = 1269 bits (640), Expect = 0.0
 Identities = 643/644 (99%)
 Strand = Plus / Plus

                                                                        
Query: 599  aaaggagattacaggatgacctatggtgtggttctcaatcttgtgaacattcagatcatg 658
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2    aaaggagattacaggatgacccatggtgtggttctcaatcttgtgaacattcagatcatg 61

                                                                        
Query: 659  aaaatgttaacaatgaatctgctgagaacattgtacagaagcggaaaattgttggaagct 718
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   aaaatgttaacaatgaatctgctgagaacattgtacagaagcggaaaattgttggaagct 121

                                                                        
Query: 719  caagattaacagacaattctactctaccttcagatcaagtatctagaaaaagaagttgtt 778
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  caagattaacagacaattctactctaccttcagatcaagtatctagaaaaagaagttgtt 181

                                                                        
Query: 779  ctaaggactcaagtttacccgttcattcatctggtgccccgatatttgtaaatttaactg 838
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  ctaaggactcaagtttacccgttcattcatctggtgccccgatatttgtaaatttaactg 241

                                                                        
Query: 839  cggatgcacaaaaaatcggatctatcactgaatatcaaattggatctcaacaacgaagtt 898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  cggatgcacaaaaaatcggatctatcactgaatatcaaattggatctcaacaacgaagtt 301

                                                                        
Query: 899  ttggattagaaaggatttcaaattctcaatctgaatctcaggctggatctagttctgcaa 958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  ttggattagaaaggatttcaaattctcaatctgaatctcaggctggatctagttctgcaa 361

                                                                        
Query: 959  atttatcaagcctgcctaggctactttctggggataataaaacatttcattccgaagaat 1018
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  atttatcaagcctgcctaggctactttctggggataataaaacatttcattccgaagaat 421

                                                                        
Query: 1019 ctgcaatgtgggagtgtccgatgtgcactctgttgaatcaaacatttgctcctatatgtg 1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  ctgcaatgtgggagtgtccgatgtgcactctgttgaatcaaacatttgctcctatatgtg 481

                                                                        
Query: 1079 agttgtgtggcacgcaacaaccaaaagatgttaccaccaagtacagcacttggtcttgca 1138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482  agttgtgtggcacgcaacaaccaaaagatgttaccaccaagtacagcacttggtcttgca 541

                                                                        
Query: 1139 aattctgtaccttggataacagtgtgaagatggagaaatgctcagcctgtgaccagtgga 1198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542  aattctgtaccttggataacagtgtgaagatggagaaatgctcagcctgtgaccagtgga 601

                                                        
Query: 1199 gatattctcatggcccgccaatgtcagtcaacctgggttcctaa 1242
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  gatattctcatggcccgccaatgtcagtcaacctgggttcctaa 645