Miyakogusa Predicted Gene

Lj6g3v0728950.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0728950.1 tr|B6SWD9|B6SWD9_MAIZE Carbohydrate binding
protein OS=Zea mays PE=2 SV=1,30.42,8e-18,PROTEIN_KINASE_ATP,Protein
kinase, ATP binding site; PROTEIN_KINASE_ST,Serine/threonine-protein
kina,CUFF.58205.1
         (1929 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS347012 similar to UniRef100_A7Q992 Cluster: Chromosom...   198   9e-50

>gnl|LJGI|FS347012 similar to UniRef100_A7Q992 Cluster: Chromosome chr19 scaffold_66,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_66, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (20%)
          Length = 626

 Score =  198 bits (100), Expect = 9e-50
 Identities = 234/278 (84%), Gaps = 3/278 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1516 actgatgtgttcagctatggtgtggtggtgcttgaagttgcttgtgggaggaggccaatt 1575
            |||||||||||||||||||| |||||||||||||| || |||||||||| ||||||||||
Sbjct: 614  actgatgtgttcagctatggggtggtggtgcttgaggtggcttgtgggaagaggccaatt 555

                                                                        
Query: 1576 gaaaaggagggtgaag---agatggtgaatttggttgattgggtttgggggcttcactct 1632
            || | ||||||||  |   |||||||||||||||| ||||||||||||||| | |||| |
Sbjct: 554  gagagggagggtggtgcaaagatggtgaatttggtggattgggtttgggggttgcactat 495

                                                                        
Query: 1633 caaggaaagataattgaagctgctgataagaagttgaatggggagtttcaggaggaggag 1692
             |||| | |||| |||| ||||| ||||||| |||||||||||| ||| | ||||| |  
Sbjct: 494  gaagggaggatacttgaggctgcagataagaggttgaatggggaatttgatgaggaagga 435

                                                                        
Query: 1693 atgaaaaagcttttgctgttggggttgagctgtgctaaccctgatagtgcagaaaggcct 1752
            ||||  | | |  |||| ||||| |||||||||||||| |||||||||||    ||||||
Sbjct: 434  atgaggatgatgctgctattgggattgagctgtgctaatcctgatagtgctatgaggcct 375

                                                  
Query: 1753 tccatgagaagagttttgcagattcttaacaatgaagc 1790
            ||||||||||| |||||||||||||| | |||||||||
Sbjct: 374  tccatgagaagggttttgcagattctcagcaatgaagc 337