Miyakogusa Predicted Gene
- Lj6g3v0727740.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0727740.2 Non Chatacterized Hit- tr|I1N089|I1N089_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3490 PE=,84.28,0,no
description,NULL; no description,DNA-directed RNA polymerase, insert
domain; RNA_POL_D_30KD,DNA-d,CUFF.58190.2
(1164 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82648 similar to UniRef100_A7Q9B1 Cluster: Chromosome... 2196 0.0
>gnl|LJGI|TC82648 similar to UniRef100_A7Q9B1 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1364
Score = 2196 bits (1108), Expect = 0.0
Identities = 1147/1164 (98%), Gaps = 17/1164 (1%)
Strand = Plus / Plus
Query: 1 atgaaagaggagttaatgtcagagggtgaagaacaagaacagagcaatggaggaatactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgaaagaggagttaatgtcagagggtgaagaacaagaacagagcaatggaggaatactt 112
Query: 61 gactacataatgaacttggagagcgttccacagaagctacctccacacctcgagcttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gactacataatgaacttggagagcgttccacagaagctacctccacacctcgagcttctc 172
Query: 121 aggactcgcgtcctttgcaacgtcgatgctcctcagcatacagataccatccagtattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aggactcgcgtcctttgcaacgtcgatgctcctcagcatacagataccatccagtattct 232
Query: 181 ggtgcttatgcagcgctaggtgttgacaatagtttgcggtttgatgatttctgtaagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ggtgcttatgcagcgctaggtgttgacaatagtttgcggtttgatgatttctgtaagaac 292
Query: 241 ttcaaggttgaggtgaaacggttgacggatgatgaaatggagtttgatatgattggtatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttcaaggttgaggtgaaacggttgacggatgatgaaatggagtttgatatgattggtatt 352
Query: 301 gatccagcaattgccaatgcatttcgacgtatccttatatcagaggtcccaacaatggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gatccagcaattgccaatgcatttcgacgtatccttatatcagaggtcccaacaatggct 412
Query: 361 cttgaaagagtttatattgcaaacaatacatcacttgtacaagatgaagttcttgctcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cttgaaagagtttatattgcaaacaatacatcacttgtacaagatgaagttcttgctcat 472
Query: 421 agattgggcctcgttccaatcaatgctgatccaaggttatttgaatatccagataatgcg 480
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 473 agattgggcctcgttccaatcaatgctgatccaag-----------------ataatgcg 515
Query: 481 ggagagaataatgaaaagaatagcattgtcttcaaactacatgttcattgtaaaaagggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggagagaataatgaaaagaatagcattgtcttcaaactacatgttcattgtaaaaagggt 575
Query: 541 cagcctcgtattactgtgttatcggatcagctgaagtggttacctaatgggagtgagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cagcctcgtattactgtgttatcggatcagctgaagtggttacctaatgggagtgagctt 635
Query: 601 atcgctgaagataccaaaccaaatacagattcaaaaccaaaaacatttacttcttttacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atcgctgaagataccaaaccaaatacagattcaaaaccaaaaacatttacttcttttacc 695
Query: 661 tgcagccaagactcccttcctgaattttccagcaatccacctggtcctagatatttggat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tgcagccaagactcccttcctgaattttccagcaatccacctggtcctagatatttggat 755
Query: 721 attataatagataaacttggacctggtcaggaaatcgaacttgaagctcatgcagttaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 attataatagataaacttggacctggtcaggaaatcgaacttgaagctcatgcagttaaa 815
Query: 781 ggcatcggtaagacacacgcaaaatggtcaccggtttccactgcttggtataggatgctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ggcatcggtaagacacacgcaaaatggtcaccggtttccactgcttggtataggatgctt 875
Query: 841 ccagaggttgtactcttggaagatgttcaggatgagttggctgaagaactaaaaaataaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 ccagaggttgtactcttggaagatgttcaggatgagttggctgaagaactaaaaaataaa 935
Query: 901 tgtccacttaaagtatttgatattgaagatatcggaaaaggtaaaagaagggcaaaagta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 tgtccacttaaagtatttgatattgaagatatcggaaaaggtaaaagaagggcaaaagta 995
Query: 961 gccagaccacgggactgcactttgtgtagggaatgcatcagaggtggtaaagaatgggaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 gccagaccacgggactgcactttgtgtagggaatgcatcagaggtggtaaagaatgggaa 1055
Query: 1021 gatcgtgtatcattacgtcgtgtcaaagatcatttcattttcactgttgaatcaactgga 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 gatcgtgtatcattacgtcgtgtcaaagatcatttcattttcactgttgaatcaactgga 1115
Query: 1081 gctttaccaccggagctgctatttactgaagctgtgaagattctggaagataagtgtgaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 gctttaccaccggagctgctatttactgaagctgtgaagattctggaagataagtgtgaa 1175
Query: 1141 cgcgtgattactgagctgtcttga 1164
||||||||||||||||||||||||
Sbjct: 1176 cgcgtgattactgagctgtcttga 1199