Miyakogusa Predicted Gene

Lj6g3v0727670.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0727670.1 Non Chatacterized Hit- tr|Q22WK5|Q22WK5_TETTS
Putative uncharacterized protein OS=Tetrahymena
thermo,36.56,0.4,coiled-coil,NULL; seg,NULL,CUFF.58181.1
         (1020 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71180 weakly similar to UniRef100_A4RUA2 Cluster: Pre...   335   3e-91

>gnl|LJGI|TC71180 weakly similar to UniRef100_A4RUA2 Cluster: Predicted protein; n=1;
           Ostreococcus lucimarinus CCE9901|Rep: Predicted protein
           - Ostreococcus lucimarinus (strain CCE9901), partial
           (17%)
          Length = 1653

 Score =  335 bits (169), Expect = 3e-91
 Identities = 187/193 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgcagattggtggaaagccctcgacaggcttgatgaatccctgaagcgttcccat 60
           ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 801 atggatgtagattggtggaaagctctcgacaggcttgatgaatccctgaagcgttcccat 860

                                                                       
Query: 61  gaagcagctcgccgacgtgaagaagttcgcctgcgagaagaagcggcagcggcgtatgag 120
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 861 gaagcagctcgccgacgtgaagaagttcgccagggagaagaagcggcagcggcgtatgag 920

                                                                       
Query: 121 cggcacatggccgaatacgagcagtacatggcggcgtacgagcggtacgaagccaaagcg 180
           || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 cgccacgtggccgaatacgagcagtacatggcggcgtacgagcggtacgaagccaaagcg 980

                        
Query: 181 gcagcggcggcgg 193
           |||||||||||||
Sbjct: 981 gcagcggcggcgg 993