Miyakogusa Predicted Gene
- Lj6g3v0714560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0714560.1 Non Chatacterized Hit- tr|A5BDK1|A5BDK1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,33.77,0.00006,no description,Zinc finger, RING/FYVE/PHD-type;
seg,NULL; RING FINGER PROTEIN 6/12/38,NULL; zf-RING_,CUFF.58589.1
(1017 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV774436 549 e-155
gnl|LJGI|DC596673 similar to UniRef100_A7Q9D3 Cluster: Chromosom... 234 9e-61
gnl|LJGI|TC78994 homologue to UniRef100_A7Q9D3 Cluster: Chromoso... 147 2e-34
gnl|LJGI|AV772411 139 4e-32
>gnl|LJGI|AV774436
Length = 508
Score = 549 bits (277), Expect = e-155
Identities = 310/321 (96%)
Strand = Plus / Minus
Query: 697 ccactagttagcaccctcctcggatacaacatgaacatgggttcctctgctagaggtgcc 756
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 508 ccactagttagcaccctcctcggatacgacatgcacatgggttcctctgctagaggtgcc 449
Query: 757 tctgaggatcaaatctcacaacttgccagctggaaatttaaagctgctcatgccaactta 816
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 448 tctgaggatcaaatctcactacttgccagctggaaatgtaaagctgctcatgccaactta 389
Query: 817 gacctcagcaatgatgaccctcaaagcagtgaaagattgatcaatgaagatcctgagtgt 876
||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||
Sbjct: 388 gacctcagccatgatgaccctcaaaccagtgacagattgatctatgaagatcctgagtgt 329
Query: 877 tgcatttgcttagccaagtacaaagacaaggaagaagttaggcaactgccctgttcccat 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgcatttgcttagccaagtacaaagacaaggaagaagttaggcaactgccctgttcccat 269
Query: 937 ttgttccaccaaaaatgtgtggatcaatggctaaagattatatcatgctgtcctctttgt 996
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttgttccacccacaatgtgtggatcaatggctaaagattatatcatgctgtcctctttgt 209
Query: 997 aaacaaggattacaaagatag 1017
| |||||||||||||||||||
Sbjct: 208 atacaaggattacaaagatag 188
>gnl|LJGI|DC596673 similar to UniRef100_A7Q9D3 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 574
Score = 234 bits (118), Expect = 9e-61
Identities = 235/274 (85%)
Strand = Plus / Plus
Query: 517 tcactggaacttttctttgccatatggtttgtaatgggaaatgtttgggcatttgactca 576
||||| || ||||||| |||||||||||||| |||||||||||||||| || |||||
Sbjct: 24 tcacttgagcttttctacgccatatggtttgtgatgggaaatgtttgggttttcgactcg 83
Query: 577 cgttttggatcattccaacaagctccaaagctccaaatcctctgcatcatccttcttgct 636
||||||||||| || || ||||||||||||||||| | |||||||||| ||| ||||||
Sbjct: 84 cgttttggatcttttcatcaagctccaaagctccatgtgctctgcatcaccctgcttgct 143
Query: 637 tggaatgcaatctgctactctttcccttttctgctgtttcttctcctctgctgttgcgtg 696
||||||||||||||||||||||||||||| || |||||||| || | ||||| ||||||
Sbjct: 144 tggaatgcaatctgctactctttccctttcctactgtttctactgttatgctgctgcgtg 203
Query: 697 ccactagttagcaccctcctcggatacaacatgaacatgggttcctctgctagaggtgcc 756
|| ||| ||||||||||||| || |||||||||||||||| || ||| |||||| ||
Sbjct: 204 cctctaattagcaccctccttggctacaacatgaacatggtctcttctaatagaggagca 263
Query: 757 tctgaggatcaaatctcacaacttgccagctgga 790
||||| |||||||| ||||||||| |||| ||||
Sbjct: 264 tctgatgatcaaatttcacaacttcccagttgga 297
>gnl|LJGI|TC78994 homologue to UniRef100_A7Q9D3 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 384
Score = 147 bits (74), Expect = 2e-34
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 944 accaaaaatgtgtggatcaatggctaaagattatatcatgctgtcctctttgtaaacaag 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaaaaatgtgtggatcaatggctaaagattatatcatgctgtcctctttgtaaacaag 60
Query: 1004 gattacaaagatag 1017
||||||||||||||
Sbjct: 61 gattacaaagatag 74
>gnl|LJGI|AV772411
Length = 443
Score = 139 bits (70), Expect = 4e-32
Identities = 115/130 (88%)
Strand = Plus / Minus
Query: 879 catttgcttagccaagtacaaagacaaggaagaagttaggcaactgccctgttcccattt 938
||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||| |
Sbjct: 443 catttgcttagccaagtacaaagacaaagaagaagttagacaattgccatgttcccatat 384
Query: 939 gttccaccaaaaatgtgtggatcaatggctaaagattatatcatgctgtcctctttgtaa 998
|||||||| | ||||||||||||| ||| |||| || ||||| |||||||| |||| ||
Sbjct: 383 gttccacctacaatgtgtggatcactggttaaaaatcatatcctgctgtccactttccaa 324
Query: 999 acaaggatta 1008
||||||||||
Sbjct: 323 acaaggatta 314