Miyakogusa Predicted Gene
- Lj6g3v0673190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0673190.1 CUFF.58152.1
(670 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58604 similar to UniRef100_P09694 Cluster: Uncharacte... 1176 0.0
gnl|LJGI|TC59801 151 7e-36
>gnl|LJGI|TC58604 similar to UniRef100_P09694 Cluster: Uncharacterized protein IRL4;
n=1; Human herpesvirus 5 strain AD169|Rep:
Uncharacterized protein IRL4 - Human cytomegalovirus
(strain AD169) (HHV-5) (Human herpesvirus 5), partial
(12%)
Length = 1221
Score = 1176 bits (593), Expect = 0.0
Identities = 649/670 (96%), Gaps = 12/670 (1%)
Strand = Plus / Plus
Query: 1 atgaatgaatattggaatcaattttcctattctcccttttgctatgtttgggatcccatt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atgaatgaatattgcaatcaattttcctattctcccttttgctatgtttgggatcccatt 403
Query: 61 gaagaaatccatgtgatttctaacatggtatcagagctccaatggagctcaccgcctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaagaaatccatgtgatttctaacatggtatcagagctccaatggagctcaccgcctctt 463
Query: 121 ccgccgccactgccgtcgtcgagttacgagcgcttcctccgacctgctcgacgtggcttc 180
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ccgccgccgctgccgtcgccgagttacgagcgcttcctccgacctgctcgacgtggcttc 523
Query: 181 aagcgctgccgtcgcagcaccactgcgagaaccactgcgagattatcttccttcaatttc 240
||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 524 aagcgctgccgccgcagcacca------------ctgcgagattatcttccttcaatttc 571
Query: 241 tctgatttggtcactgattttggagacattgttgtagtttcatcttctccttcatcgttc 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 572 tctgatttggtcactgattttggagacattgctgtagtttcatcttctccttcatcgttc 631
Query: 301 tctgattcgatggtcatggcttctgattctctcatggtgcaagaatcattcgtgaaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tctgattcgatggtcatggcttctgattctctcatggtgcaagaatcattcgtgaaggtt 691
Query: 361 gaagatgaggattttgtcttgcatgctccagttcctctttcctctgcgtgctttgattct 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaagatgaggattctgtcttgcatgctccagttcctctttcctctgcgtgctttgattct 751
Query: 421 accatagatgaaacgatttctgagaagattcttgatcattttcctgtttctttcttcgcc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gccatagatgaaacgatttctgagaagattcttgatcattttcctgtttctttcttcgcc 811
Query: 481 gatcgagaaatcaagattccggcgtggaaaccggcgattgagccgttcgtttttggcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gatcgagaaatcaagattccggcgtggaaaccggcgattgagccgttcgtttttggcact 871
Query: 541 atcagcaagggtttcttcgtttcttcttcattgctggattcatcgtccactcgcgatgct 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 872 atcagcaagggtttcttcgtttcttcttcattgctgggttcatcgtccactcgcgatgct 931
Query: 601 actacaacttccaattctggttcttcgtccttctctgattcagccatggttgaaactgtg 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 actacaacttccaattatggttcttcgtccttctctgattcagccatggttgaaactgtg 991
Query: 661 cctgagaaaa 670
||||||||||
Sbjct: 992 cctgagaaaa 1001
>gnl|LJGI|TC59801
Length = 1003
Score = 151 bits (76), Expect = 7e-36
Identities = 106/116 (91%), Gaps = 5/116 (4%)
Strand = Plus / Plus
Query: 455 atcattttcctgtttctttcttcgccgatcgagaaatcaagattccggcgtggaaaccgg 514
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 31 atcattttcctgtttctttcttcgccgatcgagaa-----gattccggcgtggaaaccgg 85
Query: 515 cgattgagccgttcgtttttggcactatcagcaagggtttcttcgtttcttcttca 570
||||||| |||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 86 cgattgatccgttcgtttttggcactttcagcaagggtttcttgattccttcttca 141