Miyakogusa Predicted Gene
- Lj6g3v0670130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0670130.1 Non Chatacterized Hit- tr|I3SQ56|I3SQ56_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.55,0,seg,NULL;
K homology RNA-binding domain,K Homology domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAME,CUFF.58147.1
(664 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65199 similar to UniRef100_A7PGM2 Cluster: Chromosome... 1316 0.0
gnl|LJGI|TC76692 similar to UniRef100_A7PGM2 Cluster: Chromosome... 706 0.0
>gnl|LJGI|TC65199 similar to UniRef100_A7PGM2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 962
Score = 1316 bits (664), Expect = 0.0
Identities = 664/664 (100%)
Strand = Plus / Plus
Query: 1 atgcagtcgaacgaggcaccttctaccatggaagttgaagcttccccatctgaacccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atgcagtcgaacgaggcaccttctaccatggaagttgaagcttccccatctgaacccaaa 135
Query: 61 gttctgccaccgaagccgttgtttgagcctttgaagcctcatgagatgtcggatgggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gttctgccaccgaagccgttgtttgagcctttgaagcctcatgagatgtcggatgggcag 195
Query: 121 gttcagttccgcaaggtgtctgttccgcctcatcgttatacgcctctcaagaaagcctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gttcagttccgcaaggtgtctgttccgcctcatcgttatacgcctctcaagaaagcctgg 255
Query: 181 atggatctctacactccgatatatgaacagatgaagatcgatgtccgtatgaatctgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atggatctctacactccgatatatgaacagatgaagatcgatgtccgtatgaatctgaag 315
Query: 241 gctagaaaagttgagttgaaaacaaggcgtgatacacctgatattagtaacctgcaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gctagaaaagttgagttgaaaacaaggcgtgatacacctgatattagtaacctgcaaaaa 375
Query: 301 tgtgctgatttcgtccatgctttcatgttgggatttgatgtcatcgatgccattgcactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgtgctgatttcgtccatgctttcatgttgggatttgatgtcatcgatgccattgcactt 435
Query: 361 ttgcgtttggatgagctctatattgagtcttttgagatcaaggatgttaaaacacttcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttgcgtttggatgagctctatattgagtcttttgagatcaaggatgttaaaacacttcgt 495
Query: 421 ggtgatcacttgtcccgtgctattggaagactatccggcaaaggtggtaaaacaaagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggtgatcacttgtcccgtgctattggaagactatccggcaaaggtggtaaaacaaagttt 555
Query: 481 gcaattgagaatgcatccaagacaagaatcgtgattgctgactccaaaattcatatactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcaattgagaatgcatccaagacaagaatcgtgattgctgactccaaaattcatatactg 615
Query: 541 ggatcttttgccaacatcaagattgccagggattctctttgtagcctaattatgggatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggatcttttgccaacatcaagattgccagggattctctttgtagcctaattatgggatca 675
Query: 601 cctgcaggaaaggtatactccaagctaagagcagttacttctagactggcagaaaggttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cctgcaggaaaggtatactccaagctaagagcagttacttctagactggcagaaaggttt 735
Query: 661 tgat 664
||||
Sbjct: 736 tgat 739
>gnl|LJGI|TC76692 similar to UniRef100_A7PGM2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1126
Score = 706 bits (356), Expect = 0.0
Identities = 591/667 (88%), Gaps = 3/667 (0%)
Strand = Plus / Plus
Query: 1 atgcagtcgaacgaggcaccttctaccatggaagttgaagcttccccatctgaacccaaa 60
|||||||| ||||||||||||||| | ||||||||||||||| |||||||||||||||
Sbjct: 249 atgcagtcaaacgaggcaccttcttcaatggaagttgaagctgtcccatctgaacccaag 308
Query: 61 gttctgccaccgaagccgttgtttgagcctttgaagcctcatgagatgtcggatgggcag 120
|| | ||||| ||||| ||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 309 cttttaccaccaaagccaaagtttgagcctttgaaacctcatgagatgtctgatggtcag 368
Query: 121 gttcagttccgcaaggtgtctgttccgcctcatcgttatacgcctctcaagaaagcctgg 180
||||||||||||||||||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 369 gttcagttccgcaaggtgtctgttccgccgcatcgttacactcctcttaagaaagcttgg 428
Query: 181 atggatctctacactccgatatatgaacagatgaagatcgatgtccgtatgaatctgaag 240
|||||||||||||| || | |||||||||||||| || || ||||||||||| |||||
Sbjct: 429 atggatctctacacccctgtctatgaacagatgaaaattgacatccgtatgaatttgaag 488
Query: 241 gctagaaaagttgagttgaaaacaaggcgtgatacacctgatattagtaacctgcaaaaa 300
||| | ||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 489 gctcggaaagttgagctgaagacaaggcgtgatacacctgatatcagtaacctgcagaaa 548
Query: 301 tgtgctgatttcgtccatgctttcatgttgggatttgatgtcatcgatgccattgcactt 360
||||||||||| ||||||||||||||| | || ||||||||||| || |||||||| |||
Sbjct: 549 tgtgctgattttgtccatgctttcatgctcggttttgatgtcatagacgccattgcgctt 608
Query: 361 ttgcgtttggatgagctctatattgagtcttttgagatcaaggatgttaaaacacttcgt 420
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 609 ctgcgtttggatgagctctatatcgagtcctttgagatcaaggatgttaaaacacttcga 668
Query: 421 ggtgatcacttgtcccgtgctattggaagactatccggcaaaggtggtaaaacaaagttt 480
|| ||||||||||||||||||||||||||| | || || |||||||||||||| |||||
Sbjct: 669 ggcgatcacttgtcccgtgctattggaagattgtctggtaaaggtggtaaaacgaagttc 728
Query: 481 gcaattgagaatgcatccaagacaagaatcgtgattgctgactccaaaattcatatactg 540
|||||||||||||| ||||||||||||||||||||||||||| | |||| || || |||
Sbjct: 729 gcaattgagaatgcgtccaagacaagaatcgtgattgctgacagccaaatccacattctg 788
Query: 541 ggatcttttgccaacatcaagattgccagggattctctttgtagcctaattatgggatca 600
||||||||||| || | |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 789 ggatcttttgcttaccttaagattgccagggattctctttgtagcctaatcctgggatca 848
Query: 601 cctgcagg--aaaggtatactccaagcta-agagcagttacttctagactggcagaaagg 657
|| ||||| || ||| |||||| | ||| |||||||||||||||||||| |||||||||
Sbjct: 849 ccagcaggacaacggtgtactcccaactacagagcagttacttctagactcgcagaaagg 908
Query: 658 ttttgat 664
|||||||
Sbjct: 909 ttttgat 915