Miyakogusa Predicted Gene

Lj6g3v0658950.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0658950.2 Non Chatacterized Hit- tr|I1KYR7|I1KYR7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.79,0,Na_Ca_ex,Sodium/calcium exchanger membrane region; FAMILY
NOT NAMED,NULL,CUFF.58133.2
         (663 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS332790 similar to UniRef100_A7Q9G3 Cluster: Chromosom...   402   e-111
gnl|LJGI|FS359313 similar to UniRef100_A7Q2V3 Cluster: Chromosom...   107   9e-23

>gnl|LJGI|FS332790 similar to UniRef100_A7Q9G3 Cluster: Chromosome chr19 scaffold_66,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_66, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 701

 Score =  402 bits (203), Expect = e-111
 Identities = 203/203 (100%)
 Strand = Plus / Plus

                                                                       
Query: 99  gcagctagcattttacactggagatactgttgggggtctcttaaacgctacgtttggaaa 158
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcagctagcattttacactggagatactgttgggggtctcttaaacgctacgtttggaaa 558

                                                                       
Query: 159 tgcaacagaattgatcatctcaatatatgcactgaaaagtggaatgactcaggttgtcaa 218
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgcaacagaattgatcatctcaatatatgcactgaaaagtggaatgactcaggttgtcaa 618

                                                                       
Query: 219 gctctctctactgggctcaattttgtcaaacatgttgctggtgcttggatgtgcattctt 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gctctctctactgggctcaattttgtcaaacatgttgctggtgcttggatgtgcattctt 678

                                  
Query: 279 atgtggtgggattgtatttcatg 301
           |||||||||||||||||||||||
Sbjct: 679 atgtggtgggattgtatttcatg 701


>gnl|LJGI|FS359313 similar to UniRef100_A7Q2V3 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 670

 Score =  107 bits (54), Expect = 9e-23
 Identities = 54/54 (100%)
 Strand = Plus / Minus

                                                                 
Query: 610 cttttagttatgactgcttggatatcaatcttgtcagaatatttggttggcgct 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cttttagttatgactgcttggatatcaatcttgtcagaatatttggttggcgct 617