Miyakogusa Predicted Gene
- Lj6g3v0647480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0647480.1 Non Chatacterized Hit- tr|D8U4J9|D8U4J9_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,28.52,1e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,Translocation protein Sec62; Sec62,Translocation protein
,CUFF.58107.1
(1095 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58029 similar to UniRef100_A7NZQ2 Cluster: Chromosome... 2129 0.0
gnl|LJGI|TC81015 198 5e-50
>gnl|LJGI|TC58029 similar to UniRef100_A7NZQ2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (79%)
Length = 1362
Score = 2129 bits (1074), Expect = 0.0
Identities = 1088/1095 (99%)
Strand = Plus / Plus
Query: 1 atgaagaagtcttcaggtggcgctgccgagaagaagcgcgtgcgacgctcctccgctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atgaagaagtcttcaggtggcgctgccgagaagaagcgcgtgcgacgctcctccgctcca 149
Query: 61 gatctcacctccgatgctcctcctaggaaacaggctgctaagaaagatgtgtttcaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gatctcacctccgatgctcctcctaggaaacaggctgctaagaaagatgtgtttcaagtg 209
Query: 121 tttgctgagaaggtgagagaccataaggatttggtctcgagatgggctgttctacaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tttgctgagaaggtgagagaccataaggatttggtctcgagatgggctgttctacaggag 269
Query: 181 acgcgtgttgagtatttcagagggaaggatttcgcgagcttcttgaaaaatcatcccgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 acgcgtgttgagtatttcagagggaaggatttcgcgagcttcttgaaaaatcatcccgag 329
Query: 241 gtcaaagatattctagaatcagataggaacttagaaactgaggatattgccaacattcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gtcaaagatattctagaatcagataggaacttagaaactgaggatattgccaacattcta 389
Query: 301 cttgcgaaaaatcttctagtgcgctgtgatcgagtggttaaaactgttcgtcctgggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cttgcgaaaaatcttctagtgcgctgtgatcgagtggttaaaactgttcgtcctgggaag 449
Query: 361 aaaaagttgtctacttggcctgcacatttagagattttccctgagcaaatattttctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aaaaagttgtctacttggcctgcacatttagagattttccctgagcaaatattttctgaa 509
Query: 421 aatgatgcnnnnnnngcgtggacatttgcaaaacggcatccactttggcaaacgctcctc 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aatgatgctttttttgcgtggacatttgcaaaacggcatccactttggcaaacgctcctc 569
Query: 481 tcatttttctggcctgtgttgacattggctatttgcctatttcccgtgtaccctcatcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcatttttctggcctgtgttgacattggctatttgcctatttcccgtgtaccctcatcgc 629
Query: 541 tgcaagctattaatactttactcatgtgctggaatactttttctgattctctctctactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgcaagctattaatactttactcatgtgctggaatactttttctgattctctctctactt 689
Query: 601 ttgataagaggtgcaatatttggtgctttatatattttccttggaaagcgtgtctggttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ttgataagaggtgcaatatttggtgctttatatattttccttggaaagcgtgtctggttt 749
Query: 661 ttccccaatatccttgctgaggaagcaacgctgggagagttattcagattttggcctaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ttccccaatatccttgctgaggaagcaacgctgggagagttattcagattttggcctaag 809
Query: 721 aaagatgaagaggaaagaccaaagtggacgacaaggattttctatgctgtggtagctgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 aaagatgaagaggaaagaccaaagtggacgacaaggattttctatgctgtggtagctgtg 869
Query: 781 ctgttcatattattgcttaggcatcatgctcctgatgaagctgccagagcaagatatcag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ctgttcatattattgcttaggcatcatgctcctgatgaagctgccagagcaagatatcag 929
Query: 841 aagagggtatctaacatcattgatgatgttctggaatggtctcctagtttagccttgtcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 aagagggtatctaacatcattgatgatgttctggaatggtctcctagtttagccttgtcc 989
Query: 901 gggatgatggataagcaacaaaatgtgtctaatgccacagggtccagtgatgctgcctca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 gggatgatggataagcaacaaaatgtgtctaatgccacagggtccagtgatgctgcctca 1049
Query: 961 caagcaagccaaacaggaccggaggatgcagctccggctgatggtagtgaaactttcaca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 caagcaagccaaacaggaccggaggatgcagctccggctgatggtagtgaaactttcaca 1109
Query: 1021 gaacagtatgatactgaagaagtcatggataacatagaggatgctggtgaagaagataaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 gaacagtatgatactgaagaagtcatggataacatagaggatgctggtgaagaagataaa 1169
Query: 1081 caacatcatgattaa 1095
|||||||||||||||
Sbjct: 1170 caacatcatgattaa 1184
>gnl|LJGI|TC81015
Length = 373
Score = 198 bits (100), Expect = 5e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 996 ggctgatggtagtgaaactttcacagaacagtatgatactgaagaagtcatggataacat 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgatggtagtgaaactttcacagaacagtatgatactgaagaagtcatggataacat 60
Query: 1056 agaggatgctggtgaagaagataaacaacatcatgattaa 1095
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaggatgctggtgaagaagataaacaacatcatgattaa 100