Miyakogusa Predicted Gene

Lj6g3v0647440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0647440.1 Non Chatacterized Hit- tr|I1MH32|I1MH32_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,55.1,1e-18,DUF565,Uncharacterised protein family
Ycf20,CUFF.58103.1
         (458 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69488 similar to UniRef100_A9RDZ3 Cluster: Predicted ...   892   0.0  

>gnl|LJGI|TC69488 similar to UniRef100_A9RDZ3 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (85%)
          Length = 1347

 Score =  892 bits (450), Expect = 0.0
 Identities = 456/458 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggcacaatcattgagcttgatctctggaggcctcggatttcgtccaattccgataacc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  atggcacaatcattgagcttgatctctggaggcctcggatttcgtccaattccgataacc 655

                                                                        
Query: 61   aaagtcagtgtatcaggaaggtttacacccagatcttcagcagtgcttcgcattcaggct 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 656  aaagtcagtgtatcaggaaggtttacacccagatcttcagcagtgcttcgcattcgggct 715

                                                                        
Query: 121  gtgcaggagaatggtggaccgcgtagactagtggacatagtcaggctcattcctgagctc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  gtgcaggagaatggtggaccgcgtagactagtggacatagtcaggctcattcctgagctc 775

                                                                        
Query: 181  tcaaagaactactttaaaagtccttctcgcagggccctatttggcggaatctcattgctt 240
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  tcaaaggactactttaaaagtccttctcgcagggccctatttggcggaatctcattgctt 835

                                                                        
Query: 241  ggtggattttatgttgcacaaacaatctctctgtcttttggagctttaggagtcaatgat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  ggtggattttatgttgcacaaacaatctctctgtcttttggagctttaggagtcaatgat 895

                                                                        
Query: 301  gttattgcagcagttttatgtgttcttcttacagagtatgttacaaagttttattacagc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  gttattgcagcagttttatgtgttcttcttacagagtatgttacaaagttttattacagc 955

                                                                        
Query: 361  cggccaaaagttactttcccaattgctcttctcaacaacttcaaaatgggtttcacctat 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  cggccaaaagttactttcccaattgctcttctcaacaacttcaaaatgggtttcacctat 1015

                                                  
Query: 421  ggactcttcattgatgcatttaagcttgccagttgatt 458
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 ggactcttcattgatgcatttaagcttgccagttgatt 1053