Miyakogusa Predicted Gene
- Lj6g3v0607050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0607050.1 tr|Q84TM8|Q84TM8_MEDSA Polygalactorunase PG11
(Precursor) OS=Medicago sativa PE=3 SV=1,50.6,4e-18,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,Pectin lyase fold;
Pectin lyase-like,gene.g64506.t1.1
(1026 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61454 similar to UniRef100_O82019 Cluster: Polygalact... 98 1e-19
>gnl|LJGI|TC61454 similar to UniRef100_O82019 Cluster: Polygalacturonase precursor;
n=1; Medicago sativa|Rep: Polygalacturonase precursor -
Medicago sativa (Alfalfa), partial (86%)
Length = 1429
Score = 97.6 bits (49), Expect = 1e-19
Identities = 376/485 (77%)
Strand = Plus / Plus
Query: 397 aacactgatggaatccacattggaagatcaactctagtgaacattactaacacaaacatt 456
||||| |||||||||||| |||||||||||||| ||||| ||| ||||||||| |||
Sbjct: 640 aacacagatggaatccacgttggaagatcaactgatgtgaagattcttaacacaaatatt 699
Query: 457 gctactggcgatgattgcatctctttgggtgatggcagcaaacagattaatgtcttaaat 516
| ||| || ||||||||| |||| || |||||||| | ||| | | ||| ||||
Sbjct: 700 ggtaccggagatgattgcgtctcattaggtgatggaataaaaaatgtacttgttcaaaat 759
Query: 517 gtgacatgcggacccggacatggcattagtgttggaagcctcggaaagtatccaaatgaa 576
|| | |||||||| || ||||| ||||||||||| |||||||||||||| || |||||
Sbjct: 760 gtcaactgcggaccaggtcatggtattagtgttggtagcctcggaaagtacccggatgaa 819
Query: 577 gaacctgtagagggtatcacagtcagaaattgcacactcaacaacacagataatggtgtg 636
| |||||||| || | || | |||||||| | | ||||| ||||||||||||
Sbjct: 820 aagcctgtagaaggattttatgtaaagaattgcactttgacaaacactgataatggtgtg 879
Query: 637 aggatcaagacttggcctggtactccaggagctattacagtgtctgatttgcattttgag 696
|||||||||||||||||| | || |||||| | | | | | ||| ||||||| ||
Sbjct: 880 aggatcaagacttggcctagcaccccaggaacagctcctataaccgatatgcatttcgaa 939
Query: 697 gacattgccatgtttaatgtcaggaaccctgtaattatagatcaagagtactgcccttgg 756
|||||| |||| | ||||| | ||||||| | || || || |||||||| || || |||
Sbjct: 940 gacattatcatggtcaatgtaaagaaccctattatcatcgaccaagagtattgtccatgg 999
Query: 757 aaccaatgcacaaaacagactccatcaaaaatcaaaatcagtaaggttaccttcaaaaac 816
||||||||| | ||| ||| |||||| ||||| || || || |||||| | ||||| |||
Sbjct: 1000 aaccaatgctccaaaaagagtccatctaaaataaagataagcaaggtttcgttcaagaac 1059
Query: 817 atttatggctcttctgcgactccagaaggaatcattctcatttgtagcagtggtgtacca 876
||| ||| |||| || ||||| |||||| | ||||| ||||| ||||||||||||||
Sbjct: 1060 attaggggcacttcagcaactccggaaggagtaattcttatttgcagcagtggtgtacct 1119
Query: 877 tgtga 881
|||||
Sbjct: 1120 tgtga 1124