Miyakogusa Predicted Gene

Lj6g3v0597010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0597010.1 tr|B9HCJ6|B9HCJ6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_867813 PE=4
SV=1,36.5,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF740,Uncharacterised protein family UPF0503; seg,,gene.g64502.t1.1
         (862 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70241 similar to UniRef100_A7NYL1 Cluster: Chromosome...    76   4e-13

>gnl|LJGI|TC70241 similar to UniRef100_A7NYL1 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 727

 Score = 75.8 bits (38), Expect = 4e-13
 Identities = 200/254 (78%)
 Strand = Plus / Plus

                                                                       
Query: 566 caagtgagtcagttagcgagaagcttattcgcagctatagtgttagttgtagaaatcagt 625
           |||||||||| |||||| |||||||| |||| |||||||||||||| ||||||||    |
Sbjct: 319 caagtgagtctgttagccagaagcttgttcggagctatagtgttagctgtagaaacactt 378

                                                                       
Query: 626 gtagttcaggcggtttagtcaatggccttggggttcctgagaccaaaggcaatgttttga 685
           ||||    |  ||||| || |    | | |||| |||||||||||| || ||||||||||
Sbjct: 379 gtaggatggctggtttggttagcaacttgggggctcctgagaccaatggaaatgttttga 438

                                                                       
Query: 686 atggacgacaagagttgatgcttccaaagaatcgcagtgttagacactcgtcaaataatg 745
           |||||   |||||||| | |||||  | |||||| |||||| |  | ||| ||| |||| 
Sbjct: 439 atggaaagcaagagtttacgcttcacaggaatcggagtgttgggtattcgccaagtaatc 498

                                                                       
Query: 746 ttgatgccgggttgttaaggttctatttgacaccattgaagagctataggcgaagcaggt 805
           | ||  | || |||||||||||||||||||||||||||||||| |||||  ||||||  |
Sbjct: 499 tcgacacgggcttgttaaggttctatttgacaccattgaagagatatagaagaagcaaat 558

                         
Query: 806 ctggaatgagtagc 819
           |||| | |||||||
Sbjct: 559 ctgggaagagtagc 572