Miyakogusa Predicted Gene
- Lj6g3v0561720.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0561720.2 tr|A9UWY4|A9UWY4_MONBE Predicted protein
OS=Monosiga brevicollis GN=18680 PE=4 SV=1,26.56,1e-18,seg,NULL;
LMBR1,LMBR1-like membrane protein; UNCHARACTERIZED,NULL,CUFF.58028.2
(804 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60920 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 inte... 1403 0.0
gnl|LJGI|DC597925 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int... 950 0.0
gnl|LJGI|FS339411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int... 513 e-145
gnl|LJGI|FS321009 similar to UniRef100_A7R2J5 Cluster: Chromosom... 192 2e-48
>gnl|LJGI|TC60920 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (31%)
Length = 761
Score = 1403 bits (708), Expect = 0.0
Identities = 708/708 (100%)
Strand = Plus / Plus
Query: 1 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 112
Query: 61 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 172
Query: 121 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 232
Query: 181 cagcttgagaatggaggcatttctttcctttggagctggtcttattggagtacgtttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cagcttgagaatggaggcatttctttcctttggagctggtcttattggagtacgtttttg 292
Query: 241 cttacttgggcggtcgtgcctcttattcagggttttgaagatgctggggacttcactgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cttacttgggcggtcgtgcctcttattcagggttttgaagatgctggggacttcactgta 352
Query: 301 tcagaaagactgaagactagtgtacatgttaacttagtcttctatctaattttggggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tcagaaagactgaagactagtgtacatgttaacttagtcttctatctaattttggggttc 412
Query: 361 attggcctttgtggacttattctactcattatgatgcacaagagctggagtggaagtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 attggcctttgtggacttattctactcattatgatgcacaagagctggagtggaagtatt 472
Query: 421 ttgggattagccatggcttgttcgaatacttttggacttgttactggtgcatttcttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttgggattagccatggcttgttcgaatacttttggacttgttactggtgcatttcttctt 532
Query: 481 ggcttcggtttaagtgaaattcccaaaggtgtttggagaaattctgactggaccacccgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggcttcggtttaagtgaaattcccaaaggtgtttggagaaattctgactggaccacccgc 592
Query: 541 cagaaagtcctttcccacaaaattgctaaaatggctgtcaaacttgacgatgcacatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cagaaagtcctttcccacaaaattgctaaaatggctgtcaaacttgacgatgcacatcat 652
Query: 601 gaactttcgaatgctattgttgttgctcaagccacatcaaggcagatgtccaagcgcgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gaactttcgaatgctattgttgttgctcaagccacatcaaggcagatgtccaagcgcgat 712
Query: 661 ccactgagaccatacatggatgtagttgataaaatgctaactcaaatg 708
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ccactgagaccatacatggatgtagttgataaaatgctaactcaaatg 760
>gnl|LJGI|DC597925 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (21%)
Length = 573
Score = 950 bits (479), Expect = 0.0
Identities = 522/541 (96%), Gaps = 19/541 (3%)
Strand = Plus / Plus
Query: 1 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 111
Query: 61 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 171
Query: 121 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 231
Query: 181 cagcttgagaatggaggcatttctttcctttggagctggtcttattggagtacgtttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cagcttgagaatggaggcatttctttcctttggagctggtcttattggag---------- 281
Query: 241 cttacttgggcggtcgtgcctcttattcagggttttgaagatgctggggacttcactgta 300
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ---------gcggtcgtgcctcttattcagggttttgaagatgctggggacttcactgta 332
Query: 301 tcagaaagactgaagactagtgtacatgttaacttagtcttctatctaattttggggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tcagaaagactgaagactagtgtacatgttaacttagtcttctatctaattttggggttc 392
Query: 361 attggcctttgtggacttattctactcattatgatgcacaagagctggagtggaagtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 attggcctttgtggacttattctactcattatgatgcacaagagctggagtggaagtatt 452
Query: 421 ttgggattagccatggcttgttcgaatacttttggacttgttactggtgcatttcttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgggattagccatggcttgttcgaatacttttggacttgttactggtgcatttcttctt 512
Query: 481 ggcttcggtttaagtgaaattcccaaaggtgtttggagaaattctgactggaccacccgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggcttcggtttaagtgaaattcccaaaggtgtttggagaaattctgactggaccacccgc 572
Query: 541 c 541
|
Sbjct: 573 c 573
>gnl|LJGI|FS339411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (22%)
Length = 775
Score = 513 bits (259), Expect = e-145
Identities = 442/503 (87%)
Strand = Plus / Plus
Query: 1 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 60
||||||||||| |||||||||||||| || || |||| || |||||| || |||| |
Sbjct: 270 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 329
Query: 61 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 120
||||||||||| |||||||| || |||| |||||| || ||||| |||||||||||||||
Sbjct: 330 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 389
Query: 121 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 180
|| | |||||||| |||||||||||||||| || |||||||||||||| || |||||
Sbjct: 390 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 449
Query: 181 cagcttgagaatggaggcatttctttcctttggagctggtcttattggagtacgtttttg 240
|| |||||||||||| || |||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 450 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 509
Query: 241 cttacttgggcggtcgtgcctcttattcagggttttgaagatgctggggacttcactgta 300
||||| ||||| || ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 510 cttacctgggctgtggtgccccttattcagggtttcgaagatgctggggatttcactgta 569
Query: 301 tcagaaagactgaagactagtgtacatgttaacttagtcttctatctaattttggggttc 360
||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| | |
Sbjct: 570 tcagaaagattgaagactagtgtacatgttaacttggtcttctatctaattgtgggatcc 629
Query: 361 attggcctttgtggacttattctactcattatgatgcacaagagctggagtggaagtatt 420
|||||||||| |||||| |||| |||||||||||||||| ||||||| ||||||| ||
Sbjct: 630 attggccttttcggacttgttcttctcattatgatgcacagaagctggactggaagtctt 689
Query: 421 ttgggattagccatggcttgttcgaatacttttggacttgttactggtgcatttcttctt 480
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctgggatttgccatggcttgttcaaatacttttggacttgttactggtgcatttcttctt 749
Query: 481 ggcttcggtttaagtgaaattcc 503
||||| ||||| |||||||||||
Sbjct: 750 ggctttggtttgagtgaaattcc 772
>gnl|LJGI|FS321009 similar to UniRef100_A7R2J5 Cluster: Chromosome undetermined
scaffold_431, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_431,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (3%)
Length = 587
Score = 192 bits (97), Expect = 2e-48
Identities = 208/245 (84%)
Strand = Plus / Plus
Query: 1 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 60
||||||||||| |||||||||||||| || || |||| || |||||| || |||| |
Sbjct: 213 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 272
Query: 61 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 120
||||||||||| |||||||| || |||| |||||| || ||||| |||||||||||||||
Sbjct: 273 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 332
Query: 121 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 180
|| | |||||||| |||||||||||||||| || |||||||||||||| || |||||
Sbjct: 333 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 392
Query: 181 cagcttgagaatggaggcatttctttcctttggagctggtcttattggagtacgtttttg 240
|| |||||||||||| || |||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 393 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 452
Query: 241 cttac 245
|||||
Sbjct: 453 cttac 457