Miyakogusa Predicted Gene

Lj6g3v0551650.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0551650.1 Non Chatacterized Hit- tr|K4CII0|K4CII0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,43.75,0.0000000000009,F-box-like,NULL; RNI-like,NULL;
N7-RELATED PROTEIN,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; no
,CUFF.58021.1
         (984 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80874 weakly similar to UniRef100_O82023 Cluster: N7 ...   426   e-118
gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-lik...    62   7e-09
gnl|LJGI|TC70271 weakly similar to UniRef100_Q2HSK3 Cluster: Cyc...    52   7e-06

>gnl|LJGI|TC80874 weakly similar to UniRef100_O82023 Cluster: N7 protein; n=1;
           Medicago truncatula|Rep: N7 protein - Medicago
           truncatula (Barrel medic), partial (34%)
          Length = 1017

 Score =  426 bits (215), Expect = e-118
 Identities = 431/503 (85%)
 Strand = Plus / Plus

                                                                       
Query: 256 aagttttgtctccgtgccattcaacaaagttctggtcatttacaagacattagtattaaa 315
           ||||||||||||| ||||||| ||| ||| | ||||  |||  |||||||||||||| | 
Sbjct: 342 aagttttgtctccatgccattgaacgaagctgtggttctttggaagacattagtattgag 401

                                                                       
Query: 316 gatattgccactgacgatattctcaaatcaattgctgatagcggaagtcacttacggcgg 375
           ||| ||  |||||| || || ||| |||| ||||||||||||||||||||| |||| || 
Sbjct: 402 gatttttgcactgatgaaatcctccaatccattgctgatagcggaagtcacctacgacga 461

                                                                       
Query: 376 ttgcgtcttttgagatgctgggaaatttcggatgaacaattggatgaggttgtgaagaag 435
            |||| |||||||  |||||||| ||||| ||||||||||||  ||||  ||||||||||
Sbjct: 462 atgcggcttttgaactgctgggagatttctgatgaacaattgagtgagactgtgaagaag 521

                                                                       
Query: 436 cttccgcggttggaggagtttgaaatttcggtcaatatcatatctaaggatactttggaa 495
           ||||| | |||||||||||||||||||||  |||    | |||||||||| |||||||||
Sbjct: 522 cttccactgttggaggagtttgaaatttcattcagccccctatctaaggacactttggaa 581

                                                                       
Query: 496 ctcatgggaaaatgttgcccgcatttgaaagtgctgaaatttaacatgaaggaaattaaa 555
           |||||||| ||||||||||| |||||||||||||||||||||||||||| || | | |||
Sbjct: 582 ctcatgggcaaatgttgcccacatttgaaagtgctgaaatttaacatgaggggactgaaa 641

                                                                       
Query: 556 ggcgaggagtgtgatgatgaggcatttgctattgcgaaaaccatgcctcagctacgtcat 615
           |||   || |||||||||||||||||||||||||| |||||||||||||||||  |||||
Sbjct: 642 ggctttgaatgtgatgatgaggcatttgctattgcaaaaaccatgcctcagctgtgtcat 701

                                                                       
Query: 616 ctccaacttctgggaaacaggctcactaataaaggcttgattgccattcttgatggatgc 675
           || || ||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct: 702 cttcagcttttgggaaacaggctcactaataacggcttgattgctattcttgatgggtgc 761

                                                                       
Query: 676 cctcgtcttgaatctcttgatctgcgtgtttgttctaatgtcaatttgagtggaagtttg 735
           |||| ||||||||||||||| ||||||| ||||||||||||   | |||||||||| |||
Sbjct: 762 cctcatcttgaatctcttgacctgcgtgcttgttctaatgttgttctgagtggaagattg 821

                                  
Query: 736 agggaaaggtgttgtaagcagat 758
           | ||||||||||  |||||||||
Sbjct: 822 aaggaaaggtgtcttaagcagat 844


>gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (37%)
          Length = 840

 Score = 61.9 bits (31), Expect = 7e-09
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                       
Query: 593 aaaccatgcctcagctacgtcatctccaacttctgggaaacaggctcactaataaaggct 652
           |||| |||||| |||| ||||| || ||  || |||||||||| |||| |||| | ||||
Sbjct: 340 aaacaatgcctgagctgcgtcacctacagattatgggaaacagtctcagtaatgatggct 399

                                                      
Query: 653 tgattgccattcttgatggatgccctcgtcttgaatctcttga 695
           || |||| ||||||||||| ||||||| ||| |||| ||||||
Sbjct: 400 tgcttgctattcttgatggttgccctcttctcgaatatcttga 442


>gnl|LJGI|TC70271 weakly similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (28%)
          Length = 823

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 642 taataaaggcttgattgccattcttgatggatgccctcgtcttgaatctcttga 695
           |||| ||||||||  ||||||||||||||| || |||| |||||||| ||||||
Sbjct: 369 taatgaaggcttggatgccattcttgatggttgtcctcttcttgaatatcttga 422