Miyakogusa Predicted Gene

Lj6g3v0528590.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0528590.1 Non Chatacterized Hit- tr|J3N4T9|J3N4T9_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB10G2,53.26,4e-19,
,CUFF.58017.1
         (276 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70015 similar to UniRef100_A7P907 Cluster: Chromosome...   539   e-153
gnl|LJGI|TC59991 similar to UniRef100_A7P907 Cluster: Chromosome...   468   e-132
gnl|LJGI|AV767123                                                     147   4e-35

>gnl|LJGI|TC70015 similar to UniRef100_A7P907 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (72%)
          Length = 555

 Score =  539 bits (272), Expect = e-153
 Identities = 275/276 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcactcagacaagccaacctgaaaagcagtcttcatcggttgccactgttgcttca 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 153 atgagcactcagacaagccaacctgaaaagctgtcttcatcggttgccactgttgcttca 212

                                                                       
Query: 61  tgtcgaaagaagaagagtgaagaagccactttcttggaggatgtaaaggatcacattgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgtcgaaagaagaagagtgaagaagccactttcttggaggatgtaaaggatcacattgac 272

                                                                       
Query: 121 gagtttattaatgcttctatggatgaacacaaaacctgctttaagaagacaattcagaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gagtttattaatgcttctatggatgaacacaaaacctgctttaagaagacaattcagaag 332

                                                                       
Query: 181 atgtttggtttgtccaaggcagttgcagaaaagaactccaatgctgtgaaagaagttgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgtttggtttgtccaaggcagttgcagaaaagaactccaatgctgtgaaagaagttgaa 392

                                               
Query: 241 agttctctgcctcttcagacaaccgtacaagattaa 276
           ||||||||||||||||||||||||||||||||||||
Sbjct: 393 agttctctgcctcttcagacaaccgtacaagattaa 428


>gnl|LJGI|TC59991 similar to UniRef100_A7P907 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (72%)
          Length = 756

 Score =  468 bits (236), Expect = e-132
 Identities = 266/276 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcactcagacaagccaacctgaaaagcagtcttcatcggttgccactgttgcttca 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 217 atgagcactcagacaagccaacctgaaaagcagtcttcatcagttgccactgtcgcttca 276

                                                                       
Query: 61  tgtcgaaagaagaagagtgaagaagccactttcttggaggatgtaaaggatcacattgac 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 277 tgtcgaaagaagaagagtgaagacgccactttcttggaggatgtaaaggatcacattgac 336

                                                                       
Query: 121 gagtttattaatgcttctatggatgaacacaaaacctgctttaagaagacaattcagaag 180
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 337 gagtttattcatgcttctatggatgaacacaaaacctgttttaagaagacaattcagaag 396

                                                                       
Query: 181 atgtttggtttgtccaaggcagttgcagaaaagaactccaatgctgtgaaagaagttgaa 240
           |||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||
Sbjct: 397 atgtttggtttgtccaaggcaggttcagaaacgaactccaatgctgtgaaagaagttgaa 456

                                               
Query: 241 agttctctgcctcttcagacaaccgtacaagattaa 276
           ||||||||||| ||||||||||| ||||||||||||
Sbjct: 457 agttctctgccgcttcagacaactgtacaagattaa 492


>gnl|LJGI|AV767123 
          Length = 109

 Score =  147 bits (74), Expect = 4e-35
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                       
Query: 139 atggatgaacacaaaacctgctttaagaagacaattcagaagatgtttggtttgtccaag 198
           ||||||| || ||||||||||||||| ||||||||||| || ||||||||||||||| ||
Sbjct: 109 atggatggacccaaaacctgctttaaaaagacaattcaaaaaatgtttggtttgtcccag 50

                                                         
Query: 199 gcagttgcagaaaagaactccaatgctgtgaaagaagttgaaagtt 244
           ||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 49  gcagttgcaaaaaagaactccaatgctgttaaagaagttgaaagtt 4