Miyakogusa Predicted Gene

Lj6g3v0528580.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0528580.1 Non Chatacterized Hit- tr|D8UI90|D8UI90_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,26.92,0.00002,seg,NULL; TBCC,Tubulin binding cofactor C;
C_CAP_COFACTOR_C,C-CAP/cofactor C-like domain; Domain in ,CUFF.58016.1
         (1063 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71844 similar to UniRef100_Q8L5R4 Cluster: Tubulin fo...   547   e-155
gnl|LJGI|TC79430 similar to UniRef100_Q8L5R4 Cluster: Tubulin fo...   260   2e-68

>gnl|LJGI|TC71844 similar to UniRef100_Q8L5R4 Cluster: Tubulin folding cofactor C;
           n=1; Arabidopsis thaliana|Rep: Tubulin folding cofactor
           C - Arabidopsis thaliana (Mouse-ear cress), partial
           (26%)
          Length = 547

 Score =  547 bits (276), Expect = e-155
 Identities = 279/280 (99%)
 Strand = Plus / Plus

                                                                       
Query: 196 atcgactctcgcctcgccgagtcccaatccatctcctccgatccttctcagctcaaaacg 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atcgactctcgcctcgccgagtcccaatccatctcctccgatccttctcagctcaaaacg 327

                                                                       
Query: 256 cacttcaacgacatcaccgcctcgatctccgatttggaaaagctcgtcgctgaaaactcg 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cacttcaacgacatcaccgcctcgatctccgatttggaaaagctcgtcgctgaaaactcg 387

                                                                       
Query: 316 tatctcctcccctcttacgacgtccggtcctccctcaaaaccgtctccgatctcaaacgc 375
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tatctcctcccctcttacgacgtccggtcctccctcaaaaccgtctccgatctcaaacgc 447

                                                                       
Query: 376 agcctcgacagcctcgcatcggagctaatcccgaagaagaagttctcgttcaagagcaag 435
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agcctcgacagcctctcatcggagctaatcccgaagaagaagttctcgttcaagagcaag 507

                                                   
Query: 436 aacgccaccgccaagagagataaggattccgttgttccag 475
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aacgccaccgccaagagagataaggattccgttgttccag 547



 Score =  260 bits (131), Expect = 2e-68
 Identities = 131/131 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgacgacgggatcgagaagctaaccgtctccgacgacggagaagcagaagcagcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  atggacgacgacgggatcgagaagctaaccgtctccgacgacggagaagcagaagcagcg 132

                                                                       
Query: 61  ttacagaaaaagcacttatcaatgctcgagcgtctctccaaacgccaccaacaacaaccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttacagaaaaagcacttatcaatgctcgagcgtctctccaaacgccaccaacaacaaccg 192

                      
Query: 121 cgttcagacac 131
           |||||||||||
Sbjct: 193 cgttcagacac 203


>gnl|LJGI|TC79430 similar to UniRef100_Q8L5R4 Cluster: Tubulin folding cofactor C;
           n=1; Arabidopsis thaliana|Rep: Tubulin folding cofactor
           C - Arabidopsis thaliana (Mouse-ear cress), partial
           (13%)
          Length = 486

 Score =  260 bits (131), Expect = 2e-68
 Identities = 131/131 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgacgacgggatcgagaagctaaccgtctccgacgacggagaagcagaagcagcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atggacgacgacgggatcgagaagctaaccgtctccgacgacggagaagcagaagcagcg 224

                                                                       
Query: 61  ttacagaaaaagcacttatcaatgctcgagcgtctctccaaacgccaccaacaacaaccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ttacagaaaaagcacttatcaatgctcgagcgtctctccaaacgccaccaacaacaaccg 284

                      
Query: 121 cgttcagacac 131
           |||||||||||
Sbjct: 285 cgttcagacac 295



 Score =  252 bits (127), Expect = 4e-66
 Identities = 127/127 (100%)
 Strand = Plus / Plus

                                                                       
Query: 196 atcgactctcgcctcgccgagtcccaatccatctcctccgatccttctcagctcaaaacg 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atcgactctcgcctcgccgagtcccaatccatctcctccgatccttctcagctcaaaacg 419

                                                                       
Query: 256 cacttcaacgacatcaccgcctcgatctccgatttggaaaagctcgtcgctgaaaactcg 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cacttcaacgacatcaccgcctcgatctccgatttggaaaagctcgtcgctgaaaactcg 479

                  
Query: 316 tatctcc 322
           |||||||
Sbjct: 480 tatctcc 486