Miyakogusa Predicted Gene
- Lj6g3v0528540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0528540.1 Non Chatacterized Hit- tr|I1HLC5|I1HLC5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,31.53,6e-16,SOLCAR,Mitochondrial substrate/solute carrier;
MITOCARRIER,Mitochondrial carrier protein; MITOCHONDR,CUFF.58014.1
(1242 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB827990 similar to UniRef100_A7NUY8 Cluster: Chromosom... 955 0.0
gnl|LJGI|TC58728 similar to UniRef100_A7R6W5 Cluster: Chromosome... 924 0.0
gnl|LJGI|GO036155 homologue to UniRef100_A7R6W5 Cluster: Chromos... 658 0.0
gnl|LJGI|BP043580 homologue to UniRef100_Q4ABL5 Cluster: 80C09_2... 161 1e-38
gnl|LJGI|BP082425 homologue to UniRef100_Q4ABL5 Cluster: 80C09_2... 131 1e-29
gnl|LJGI|TC76864 homologue to UniRef100_A7R6W5 Cluster: Chromoso... 58 1e-07
>gnl|LJGI|CB827990 similar to UniRef100_A7NUY8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 547
Score = 955 bits (482), Expect = 0.0
Identities = 482/482 (100%)
Strand = Plus / Plus
Query: 761 acatgatcaaaactgagggcttcttttctctttacaagggtttagtaccctccattgtca 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatgatcaaaactgagggcttcttttctctttacaagggtttagtaccctccattgtca 60
Query: 821 gcatggcaccttcaggtgctgtcttctatggtgtttatgatattttaaagtcagcatatc 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcatggcaccttcaggtgctgtcttctatggtgtttatgatattttaaagtcagcatatc 120
Query: 881 tgcattcacctgagggaatgaagagaatccaacatatgaaggaagagactgaagagctaa 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcattcacctgagggaatgaagagaatccaacatatgaaggaagagactgaagagctaa 180
Query: 941 atgcttttgaccaactggaattgggtcctgttagaactttattatatggtgctattgctg 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgcttttgaccaactggaattgggtcctgttagaactttattatatggtgctattgctg 240
Query: 1001 gttgttgtgctgaagctgctacatatccctttgaagttgtaagaagacagcttcaaatgc 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttgttgtgctgaagctgctacatatccctttgaagttgtaagaagacagcttcaaatgc 300
Query: 1061 aagttcgggcaacaaggttgaataccctggcaacatgtgtcaagattgttgagcaaggag 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagttcgggcaacaaggttgaataccctggcaacatgtgtcaagattgttgagcaaggag 360
Query: 1121 gtgttcctgctttctatgcaggattaattcccagcttattgcaggtgttaccatcagcag 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgttcctgctttctatgcaggattaattcccagcttattgcaggtgttaccatcagcag 420
Query: 1181 ctattagttactttgtatacgagttcatgaagatagtcctcaaagtagaatcagcttaga 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctattagttactttgtatacgagttcatgaagatagtcctcaaagtagaatcagcttaga 480
Query: 1241 tg 1242
||
Sbjct: 481 tg 482
>gnl|LJGI|TC58728 similar to UniRef100_A7R6W5 Cluster: Chromosome undetermined
scaffold_1450, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1450,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 830
Score = 924 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Plus
Query: 124 aattctggcacggttccgtgtttttcatggactcccaagaaaagggtcggttgcgatgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aattctggcacggttccgtgtttttcatggactcccaagaaaagggtcggttgcgatgtt 416
Query: 184 ctacgggtagaaggaacacccatgttctcctcgctgagcttgtccataaacggaagcgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ctacgggtagaaggaacacccatgttctcctcgctgagcttgtccataaacggaagcgat 476
Query: 244 tccgatcagagagaagttctggggcaacatgagaaaaaggtagaagaaggtgtgtgtcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tccgatcagagagaagttctggggcaacatgagaaaaaggtagaagaaggtgtgtgtcaa 536
Query: 304 gtgaaggagaatgttcgggtcaagggatcgggtgctatgagcatgaccaaacatctctgg 363
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 537 gtgaaggagaatgttcgggtcaagggatcgggtgctatgaacatgaccaaacatctctgg 596
Query: 364 gctggagctgttgctgccatggtttcaaggacttttgttgctcctcttgagagacttaag 423
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 597 gctggagctgttgctgccatggttccaaggacttttgttgctcctcttgagagacttaag 656
Query: 424 ctggagtacatagttcgtggtgagcagaagaaccttgttgagcttatccagacaattgca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ctggagtacatagttcgtggtgagcagaagaaccttgttgagcttatccagacaattgca 716
Query: 484 gcttctcaagggttgaaaggcttttggaaggggaattttgtaaatattcttcggacggca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gcttctcaagggttgaaaggcttttggaaggggaattttgtaaatattcttcggacggca 776
Query: 544 ccctttaaggctatcaatttttatgcctatgacacgtatagaaataaattgtcg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ccctttaaggctatcaatttttatgcctatgacacgtatagaaataaattgtcg 830
Score = 111 bits (56), Expect = 1e-23
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1 atgccccatttcttgatcaaacaacccgagccctctgatttgtttttcccaggtgg 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 atgccccatttcttgatcaaacaacccgagccctctgatttgtttttcccaggtgg 289
>gnl|LJGI|GO036155 homologue to UniRef100_A7R6W5 Cluster: Chromosome undetermined
scaffold_1450, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1450,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (10%)
Length = 724
Score = 658 bits (332), Expect = 0.0
Identities = 332/332 (100%)
Strand = Plus / Plus
Query: 124 aattctggcacggttccgtgtttttcatggactcccaagaaaagggtcggttgcgatgtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aattctggcacggttccgtgtttttcatggactcccaagaaaagggtcggttgcgatgtt 452
Query: 184 ctacgggtagaaggaacacccatgttctcctcgctgagcttgtccataaacggaagcgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctacgggtagaaggaacacccatgttctcctcgctgagcttgtccataaacggaagcgat 512
Query: 244 tccgatcagagagaagttctggggcaacatgagaaaaaggtagaagaaggtgtgtgtcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tccgatcagagagaagttctggggcaacatgagaaaaaggtagaagaaggtgtgtgtcaa 572
Query: 304 gtgaaggagaatgttcgggtcaagggatcgggtgctatgagcatgaccaaacatctctgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gtgaaggagaatgttcgggtcaagggatcgggtgctatgagcatgaccaaacatctctgg 632
Query: 364 gctggagctgttgctgccatggtttcaaggacttttgttgctcctcttgagagacttaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gctggagctgttgctgccatggtttcaaggacttttgttgctcctcttgagagacttaag 692
Query: 424 ctggagtacatagttcgtggtgagcagaagaa 455
||||||||||||||||||||||||||||||||
Sbjct: 693 ctggagtacatagttcgtggtgagcagaagaa 724
Score = 111 bits (56), Expect = 1e-23
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1 atgccccatttcttgatcaaacaacccgagccctctgatttgtttttcccaggtgg 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atgccccatttcttgatcaaacaacccgagccctctgatttgtttttcccaggtgg 325
>gnl|LJGI|BP043580 homologue to UniRef100_Q4ABL5 Cluster: 80C09_21; n=1; Brassica rapa
subsp. pekinensis|Rep: 80C09_21 - Brassica rapa subsp.
pekinensis (Chinese cabbage), partial (6%)
Length = 429
Score = 161 bits (81), Expect = 1e-38
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 1162 caggtgttaccatcagcagctattagttactttgtatacgagttcatgaagatagtcctc 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 caggtgttaccatcagcagctattagttactttgtatacgagttcatgaagatagtcctc 249
Query: 1222 aaagtagaatcagcttagatg 1242
|||||||||||||||||||||
Sbjct: 248 aaagtagaatcagcttagatg 228
>gnl|LJGI|BP082425 homologue to UniRef100_Q4ABL5 Cluster: 80C09_21; n=1; Brassica rapa
subsp. pekinensis|Rep: 80C09_21 - Brassica rapa subsp.
pekinensis (Chinese cabbage), partial (6%)
Length = 375
Score = 131 bits (66), Expect = 1e-29
Identities = 75/78 (96%)
Strand = Plus / Minus
Query: 1165 gtgttaccatcagcagctattagttactttgtatacgagttcatgaagatagtcctcaaa 1224
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtgttaccatcagctgccattagttactttgtatacgagttcatgaagatagtcctcaaa 268
Query: 1225 gtagaatcagcttagatg 1242
||||||||||| ||||||
Sbjct: 267 gtagaatcagcatagatg 250
>gnl|LJGI|TC76864 homologue to UniRef100_A7R6W5 Cluster: Chromosome undetermined
scaffold_1450, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1450,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 446
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 349 accaaacatctctgggctggagctgttgctgccatggtttc 389
||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 393 accaagcatctctgggctggtgctgtagctgccatggtttc 433