Miyakogusa Predicted Gene
- Lj6g3v0528480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0528480.1 Non Chatacterized Hit- tr|A3B9S0|A3B9S0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,31.74,0.0000000000003,seg,NULL; TLD,TLDc; NUCLEOLAR
PROTEIN-RELATED,NULL; NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR
COACTIVATO,CUFF.58010.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59785 similar to UniRef100_A7R5H9 Cluster: Chromosome... 1203 0.0
gnl|LJGI|TC66851 similar to UniRef100_A7R5H9 Cluster: Chromosome... 805 0.0
gnl|LJGI|TC70737 similar to UniRef100_A7R5H9 Cluster: Chromosome... 527 e-149
gnl|LJGI|TC60232 similar to UniRef100_A7R5H9 Cluster: Chromosome... 373 e-102
>gnl|LJGI|TC59785 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 943
Score = 1203 bits (607), Expect = 0.0
Identities = 614/615 (99%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 113 cctctcctccttcctctgaagaagaagtgggggagtcaaaagaaagtgaattagagggtg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cctctcctccttcctctgaagaagaagtgggggagtcaaaagaaagtgaattagagggtg 389
Query: 173 cccatgatttagttgatgggcctgatacttcatccttcactgcattcctctattcttttt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cccatgatttagttgatgggcctgatacttcatccttcactgcattcctctattcttttt 449
Query: 233 tgtcttcctctgattctgggggaaactgtgatgtaactgcagctgctgctggtggtggta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgtcttcctctgattctgggggaaactgtgatgtaactgcagctgctgctggtggtggta 509
Query: 293 ttttattggattctgtcatgaaggaagattttcgtgtgaagagaagcttgttttccagga 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttttattggattctgtcatgaaggaagattttcgtgtgaagagaagcttgttttccagga 569
Query: 353 cacttggtctggccattcaccaagctgtcagaatgggcgggtttcgctcgaaagatcgca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cacttggtctggccattcaccaagctgtcagaatgggcgggtttcgctcgaaagatcgca 629
Query: 413 gggatgagtcggaggctgagtttgatgatgggtgtggtgttgagatgaggcattttcagc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gggatgagtcggaggctgagtttgatgatgggtgtggtgttgagatgaggcattttcagc 689
Query: 473 ctgtcaaagtgcctattcctgttgtgcctgtggatgatcatccgccggaagtttctgaac 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctgtcaaagtgcctattcctgttgtgcctgtggatgatcatccgccggaagtttctgaac 749
Query: 533 cttcgaagcttatttcagacagtgtaagaaatgctgtgtatgattcgcttccggctatta 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 cttcgaagcttatttcagacagtgtaagaaatgctgtgtatgattcgcttccggctatta 809
Query: 593 ttcatgggaggaaatggctaatgctatacagtacttggaagcatggtatatcacttgcaa 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ttcatgggaggaaatggctaatgctatacagtacttggaagcatggtatatcacttgcaa 869
Query: 653 ctctttaccggagaagcatggtttggcctggactgagtttgctggttgttggagaccgta 712
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 870 ctctttaccggagaagcatggtttggcct-gactgagtttgctggttgttggagaccgta 928
Query: 713 aaggagcagtatttg 727
|||||||||||||||
Sbjct: 929 aaggagcagtatttg 943
Score = 167 bits (84), Expect = 2e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 atgggggaaaagcaatctttgcggagtaaagcttcccactttgtttcagatctcaccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atgggggaaaagcaatctttgcggagtaaagcttcccactttgtttcagatctcaccact 277
Query: 61 cttcttctcaaccctatctctgat 84
||||||||||||||||||||||||
Sbjct: 278 cttcttctcaaccctatctctgat 301
>gnl|LJGI|TC66851 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 839
Score = 805 bits (406), Expect = 0.0
Identities = 406/406 (100%)
Strand = Plus / Plus
Query: 113 cctctcctccttcctctgaagaagaagtgggggagtcaaaagaaagtgaattagagggtg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cctctcctccttcctctgaagaagaagtgggggagtcaaaagaaagtgaattagagggtg 493
Query: 173 cccatgatttagttgatgggcctgatacttcatccttcactgcattcctctattcttttt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cccatgatttagttgatgggcctgatacttcatccttcactgcattcctctattcttttt 553
Query: 233 tgtcttcctctgattctgggggaaactgtgatgtaactgcagctgctgctggtggtggta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgtcttcctctgattctgggggaaactgtgatgtaactgcagctgctgctggtggtggta 613
Query: 293 ttttattggattctgtcatgaaggaagattttcgtgtgaagagaagcttgttttccagga 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttttattggattctgtcatgaaggaagattttcgtgtgaagagaagcttgttttccagga 673
Query: 353 cacttggtctggccattcaccaagctgtcagaatgggcgggtttcgctcgaaagatcgca 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cacttggtctggccattcaccaagctgtcagaatgggcgggtttcgctcgaaagatcgca 733
Query: 413 gggatgagtcggaggctgagtttgatgatgggtgtggtgttgagatgaggcattttcagc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gggatgagtcggaggctgagtttgatgatgggtgtggtgttgagatgaggcattttcagc 793
Query: 473 ctgtcaaagtgcctattcctgttgtgcctgtggatgatcatccgcc 518
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ctgtcaaagtgcctattcctgttgtgcctgtggatgatcatccgcc 839
Score = 167 bits (84), Expect = 2e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 atgggggaaaagcaatctttgcggagtaaagcttcccactttgtttcagatctcaccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgggggaaaagcaatctttgcggagtaaagcttcccactttgtttcagatctcaccact 381
Query: 61 cttcttctcaaccctatctctgat 84
||||||||||||||||||||||||
Sbjct: 382 cttcttctcaaccctatctctgat 405
>gnl|LJGI|TC70737 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(21%)
Length = 568
Score = 527 bits (266), Expect = e-149
Identities = 266/266 (100%)
Strand = Plus / Plus
Query: 839 caggagtaaaccgctacttcacactttgcacgtccgacttcatagcgataggtgggggta 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 caggagtaaaccgctacttcacactttgcacgtccgacttcatagcgataggtgggggta 61
Query: 899 gtcattttgcactttatttggatggtgacctattgaatggatcaagttcagtctcagaaa 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtcattttgcactttatttggatggtgacctattgaatggatcaagttcagtctcagaaa 121
Query: 959 cgtatgggaatccttgccttgcacactctcaagagtttgaagtgaaggaagtagagttat 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgtatgggaatccttgccttgcacactctcaagagtttgaagtgaaggaagtagagttat 181
Query: 1019 ggggctttgtatatccttcaaagtatgaggaaataatggcattaagcagaaaagaggaag 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggggctttgtatatccttcaaagtatgaggaaataatggcattaagcagaaaagaggaag 241
Query: 1079 cacttgggctctgtcactggtaaata 1104
||||||||||||||||||||||||||
Sbjct: 242 cacttgggctctgtcactggtaaata 267
>gnl|LJGI|TC60232 similar to UniRef100_A7R5H9 Cluster: Chromosome undetermined
scaffold_975, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_975, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(60%)
Length = 1527
Score = 373 bits (188), Expect = e-102
Identities = 407/480 (84%)
Strand = Plus / Plus
Query: 595 catgggaggaaatggctaatgctatacagtacttggaagcatggtatatcacttgcaact 654
||||| ||||||||||| |||||||||| ||||||| ||||||| | | ||| |||||
Sbjct: 699 catggaaggaaatggctgctgctatacagcacttggaggcatggtgtgactctttcaact 758
Query: 655 ctttaccggagaagcatggtttggcctggactgagtttgctggttgttggagaccgtaaa 714
|||||| | ||||||||| ||| |||||| | ||||||||||||||||||||| | |
Sbjct: 759 ctttacagaagaagcatgctttcacctggatcgtgtttgctggttgttggagaccaaaga 818
Query: 715 ggagcagtatttggtgccgtggttgaagcacctcttatagcgtctaacaagagaaagtac 774
|||||||| |||||| | |||||||||||||| | | | | || || | |||||| |||
Sbjct: 819 ggagcagtgtttggtagcttggttgaagcacctatgagaccatccaataggagaaaatac 878
Query: 775 cagggaacaaacaattcatttgttttcacaaatacctctggttgtcctgttatatatcgc 834
||||||||||||||| ||| |||||||||||| | ||||||| ||||||||||||||||
Sbjct: 879 cagggaacaaacaatacatatgttttcacaaacatctctggtcatcctgttatatatcgc 938
Query: 835 ccaacaggagtaaaccgctacttcacactttgcacgtccgacttcatagcgataggtggg 894
|||||||| || |||||||| ||||| ||||||| | |||| |||||| || ||||||
Sbjct: 939 ccaacaggggttaaccgctatttcacgctttgcaacactgactacatagcaattggtggg 998
Query: 895 ggtagtcattttgcactttatttggatggtgacctattgaatggatcaagttcagtctca 954
|| |||||||||| |||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 999 ggaggtcattttgcgctttatttggatggagatctattgaatggctcaagttcagtctct 1058
Query: 955 gaaacgtatgggaatccttgccttgcacactctcaagagtttgaagtgaaggaagtagag 1014
||||| ||||||||||||||||||||| | ||||| || |||||||||||||||||||||
Sbjct: 1059 gaaacttatgggaatccttgccttgcaaattctcaggaatttgaagtgaaggaagtagag 1118
Query: 1015 ttatggggctttgtatatccttcaaagtatgaggaaataatggcattaagcagaaaagag 1074
|| |||||||||||| | ||||||| ||||||||| || | ||||| ||||||| ||||
Sbjct: 1119 ttgtggggctttgtacaaacttcaaaatatgaggaagtactcgcattgagcagaacagag 1178
Score = 83.8 bits (42), Expect = 2e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 165 agagggtgcccatgatttagttgatgggcctgatacttcatccttcactgcattcctcta 224
||||||| ||||| ||||| || ||| ||||||||||||||||||||||| ||||||||
Sbjct: 254 agagggtagccatggtttagatggtggacctgatacttcatccttcactgctttcctcta 313
Query: 225 ttcttttttgtcttcctc 242
||||||| |||| |||||
Sbjct: 314 ttcttttgtgtcatcctc 331