Miyakogusa Predicted Gene
- Lj6g3v0523980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0523980.1 Non Chatacterized Hit- tr|C5X0V3|C5X0V3_SORBI
Putative uncharacterized protein Sb01g048950
OS=Sorghu,34.6,2e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.57980.1
(621 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70456 weakly similar to UniRef100_A7Q3G0 Cluster: Chr... 630 e-180
gnl|LJGI|BP037430 105 3e-22
>gnl|LJGI|TC70456 weakly similar to UniRef100_A7Q3G0 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (79%)
Length = 816
Score = 630 bits (318), Expect = e-180
Identities = 318/318 (100%)
Strand = Plus / Plus
Query: 211 cacttccacaactacgattttcgttactccctcatcgacataccccttgtttccatcata 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cacttccacaactacgattttcgttactccctcatcgacataccccttgtttccatcata 558
Query: 271 agatccttcatcatcttctgtgtttatagtttgtgtgatggaccgagactctcacgtgga 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agatccttcatcatcttctgtgtttatagtttgtgtgatggaccgagactctcacgtgga 618
Query: 331 ccttacttggggataaccacaatttgctgtgttctgtctctgatgtttgtgtcgttgaaa 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ccttacttggggataaccacaatttgctgtgttctgtctctgatgtttgtgtcgttgaaa 678
Query: 391 ggtgtttacatcttcagtaacagaacaggggaatttgcagcttctgaaattgctctgttt 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ggtgtttacatcttcagtaacagaacaggggaatttgcagcttctgaaattgctctgttt 738
Query: 451 gtgtgttcttgtgcgttggctgtggggcatgttgtcgtggcctacagaacaagttgcaga 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtgtgttcttgtgcgttggctgtggggcatgttgtcgtggcctacagaacaagttgcaga 798
Query: 511 gagagaagaaagctcatg 528
||||||||||||||||||
Sbjct: 799 gagagaagaaagctcatg 816
Score = 281 bits (142), Expect = 3e-75
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 atgtcatcaaagatgggttttctattgaaggaagagaaacacaagagaatatggaggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgtcatcaaagatgggttttctattgaaggaagagaaacacaagagaatatggaggggt 348
Query: 61 gtgaagactgtgttcttcttgatcaccatgattctatcgcttctgattttctcagccccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtgaagactgtgttcttcttgatcaccatgattctatcgcttctgattttctcagccccg 408
Query: 121 gttctcctcgttgtttgtgacg 142
||||||||||||||||||||||
Sbjct: 409 gttctcctcgttgtttgtgacg 430
>gnl|LJGI|BP037430
Length = 423
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 569 acgggtatcccagctacctgaagattcttcaagaagaaagaatcaaatgaact 621
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acgggtatcccagctacctgaagattcttcaagaagaaagaatcaaatgaact 371