Miyakogusa Predicted Gene

Lj6g3v0521710.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0521710.1 Non Chatacterized Hit- tr|B8LPV8|B8LPV8_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,29.46,0.00000000000004,no description,NULL; ATP-BINDING CASSETTE,
SUB-FAMILY F (GCN20), MEMBER 1,NULL; ATP-BINDING TRANSPOR,CUFF.57949.1
         (900 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71595 homologue to UniRef100_Q65CB1 Cluster: ABC tran...   694   0.0  
gnl|LJGI|BW596165 similar to UniRef100_Q65CB1 Cluster: ABC trans...   672   0.0  

>gnl|LJGI|TC71595 homologue to UniRef100_Q65CB1 Cluster: ABC transporter; n=1;
           Populus tremula x Populus tremuloides|Rep: ABC
           transporter - Populus tremula x Populus tremuloides,
           partial (17%)
          Length = 822

 Score =  694 bits (350), Expect = 0.0
 Identities = 365/370 (98%)
 Strand = Plus / Plus

                                                                       
Query: 531 aaagcttggtaagtttgggctgcctagtcataaccatcttacccctattgtgaaactatc 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaagcttggtaagtttgggctgcctagtcataaccatcttacccctattgtgaaactatc 60

                                                                       
Query: 591 aggagggcaaaaagctcgggttgtcttcacgtcgatatccatgtcaaaacctcacatttt 650
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aggagggcaaaaagctcgggtggtcttcacgtcgatatccatgtcaaaacctcacatttt 120

                                                                       
Query: 651 attgttagatgaaccgacaaatcatctggatatgcaaagtattgatgcattggctgatgc 710
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgttagatgaacccacaaatcatctggatatgcaaagtattgatgcattggctgatgc 180

                                                                       
Query: 711 attggatgaattcactggaggagttgttcttgttagtcatgattcaagattgatatcacg 770
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggatgaattcactggaggagttgttcttgttagtcatgattcaagattgatatcacg 240

                                                                       
Query: 771 tgtctgtggtgatgaagaaaggagtcaaatatggattgttgaggatggcactgtcagaaa 830
           ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtttgtgacgatgaagaaaggagtcaaatatggattgttgaggatggcactgtcagaaa 300

                                                                       
Query: 831 tttccctggaacatttgaggattacaaggatgatttgctgaaagagattaaagctgaagt 890
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttccctggaacatttgaggattacaaggatgatttgctgaaagagattaaagctgaagt 360

                     
Query: 891 tgatgattaa 900
           ||||||||||
Sbjct: 361 tgatgattaa 370


>gnl|LJGI|BW596165 similar to UniRef100_Q65CB1 Cluster: ABC transporter; n=1; Populus
           tremula x Populus tremuloides|Rep: ABC transporter -
           Populus tremula x Populus tremuloides, partial (21%)
          Length = 480

 Score =  672 bits (339), Expect = 0.0
 Identities = 363/371 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaagcggctaaaaggagtggaaaccgggcccaacaagaaaaggtgaaggatcgagct 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 110 atgaaagcggctaaaaggagtggaaaccgggctcaacaagaaaaggtgaaggatcgagct 169

                                                                       
Query: 61  aagtttgcagcagctaaggaagcatctaaaaacaagggtaagggcaaggtcaaggttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 170 aagtttgcagcagctaaggaagcatctaaaaacaagggtaagggcaagggcaaggttgat 229

                                                                       
Query: 121 gaggatgagaccgcaccagacgcaccacagaaatggagggattacagtgttgagttccac 180
           |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gaggatgagatcgcaccagaggcaccacagaaatggagggattacagtgttgagttccac 289

                                                                       
Query: 181 tttcctgaacctactgagctcacacctccacttatgcagcttattgaagtgagcttcagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tttcctgaacctactgagctcacacctccacttatgcagcttattgaagtgagcttcagc 349

                                                                       
Query: 241 tacccaaaccgagaggatttcagactctcaaatgttgatgttggtattgatatggggact 300
           |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 350 tacccaaaccgagatgatttcagactctcaaatgttgatgttggcattgatatggggact 409

                                                                       
Query: 301 cgtgttgccattgttgggcctaatggagctggaaaatctacactgctaaatcttctggct 360
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 410 cgtgttgccattgttgggcctaacggagctggaaaatctacactgctaaatcttctggct 469

                      
Query: 361 ggcgatttggt 371
           || ||||||||
Sbjct: 470 ggtgatttggt 480