Miyakogusa Predicted Gene
- Lj6g3v0521560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0521560.1 tr|G7JBA9|G7JBA9_MEDTR NF-X1-type zinc finger
protein NFXL1 OS=Medicago truncatula GN=MTR_3g070780 P,83.99,0,no
description,Zinc finger, NF-X1-type; NF-X1-TYPE ZINC FINGER PROTEIN
NFXL1,NULL; NUCLEAR TRANSCRIP,CUFF.57946.1
(2607 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75013 similar to UniRef100_A7Q3H8 Cluster: Chromosome... 811 0.0
gnl|LJGI|AV772111 similar to UniRef100_A7Q3H8 Cluster: Chromosom... 539 e-152
gnl|LJGI|BP058328 similar to UniRef100_A7Q3H8 Cluster: Chromosom... 260 4e-68
>gnl|LJGI|TC75013 similar to UniRef100_A7Q3H8 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 676
Score = 811 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Plus
Query: 226 gaacgcatcaagccctccgaccccacatggtcctgcacctccctctgctacgccgtcttc 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gaacgcatcaagccctccgaccccacatggtcctgcacctccctctgctacgccgtcttc 327
Query: 286 cacctcttctgcatccagagctgggctcgccaggcctccgacctctccgccttacgcgcc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cacctcttctgcatccagagctgggctcgccaggcctccgacctctccgccttacgcgcc 387
Query: 346 gccacacgcctccccatctccgccgatcaggcctcccagtccgccctctggaactgcccc 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gccacacgcctccccatctccgccgatcaggcctcccagtccgccctctggaactgcccc 447
Query: 406 aaatgcagaggcgagttctccaagacccaaatccccaaaacctacctctgcttctgcggg 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aaatgcagaggcgagttctccaagacccaaatccccaaaacctacctctgcttctgcggg 507
Query: 466 aaattggagaaccctcccagtgacgatccatgggttttgccacattcctgcggcgacgtt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaattggagaaccctcccagtgacgatccatgggttttgccacattcctgcggcgacgtt 567
Query: 526 tgccagaggccattgaagcacaattgcgggcaccactgtttgctcctctgccaccctggg 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgccagaggccattgaagcacaattgcgggcaccactgtttgctcctctgccaccctggg 627
Query: 586 ccctgcccgtcctgcccgcaactcgttaaagctcgatgcttctgtggat 634
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ccctgcccgtcctgcccgcaactcgttaaagctcgatgcttctgtggat 676
Score = 254 bits (128), Expect = 2e-66
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1 atgacctcatccccgcctcagccactttccgactccgattccgacggcggcggcccctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atgacctcatccccgcctcagccactttccgactccgattccgacggcggcggcccctcc 102
Query: 61 acctctcaggccctccgccacactgacctctccgactccatcttcaaatcctacttcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 acctctcaggccctccgccacactgacctctccgactccatcttcaaatcctacttcgat 162
Query: 121 ttctccgg 128
||||||||
Sbjct: 163 ttctccgg 170
>gnl|LJGI|AV772111 similar to UniRef100_A7Q3H8 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 423
Score = 539 bits (272), Expect = e-152
Identities = 278/280 (99%)
Strand = Plus / Minus
Query: 1091 ttgtgaggaagtcgtgtcgctgtgggagcctcaagaaagatgttccttgctatcaagatt 1150
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 423 ttgtgaggaagtcgtgtcgctgtgggagcctcaagcaagatgttccttgctatcaagatt 364
Query: 1151 tgacatgtgataggaagtgtcagacgatgcgtgattgtggtaggcatgcgtgtaagcgtc 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgacatgtgataggaagtgtcagacgatgcgtgattgtggtaggcatgcgtgtaagcgtc 304
Query: 1211 gctgctgtgatggggattgccctccctgtgcagagatatgtggcaggaggcttcgatgta 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gctgctgtgatggggattgccctccctgtgcagagatatgtggcaggaggcttcgatgta 244
Query: 1271 agagccataagtgcccttctccatgccatagaggtgcctgtgctccttgtccaataatgg 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agagccataagtgcccttctccatgccatagaggtgcctgtgctccttgtccaataatgg 184
Query: 1331 tgactatttcgtgtgcatgtggggagacacattttgaggt 1370
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 183 tgactatttcgtgtgcatgtggggagacacattctgaggt 144
>gnl|LJGI|BP058328 similar to UniRef100_A7Q3H8 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 560
Score = 260 bits (131), Expect = 4e-68
Identities = 131/131 (100%)
Strand = Plus / Minus
Query: 2477 ttcttctattgatctttattttggttatacttgttgctgctgcatattatgggtacaagg 2536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttcttctattgatctttattttggttatacttgttgctgctgcatattatgggtacaagg 501
Query: 2537 gacttttacgactcaatgattggatgaatgaagttgatgaaaaaaggcagagatattccc 2596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacttttacgactcaatgattggatgaatgaagttgatgaaaaaaggcagagatattccc 441
Query: 2597 gaatcaaatga 2607
|||||||||||
Sbjct: 440 gaatcaaatga 430