Miyakogusa Predicted Gene

Lj6g3v0519480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v0519480.1 Non Chatacterized Hit- tr|B9RMM4|B9RMM4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.36,3e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.57971.1
         (1089 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82626 similar to UniRef100_A7Q3F2 Cluster: Chromosome...   932   0.0  

>gnl|LJGI|TC82626 similar to UniRef100_A7Q3F2 Cluster: Chromosome chr13 scaffold_48,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_48, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (20%)
          Length = 1093

 Score =  932 bits (470), Expect = 0.0
 Identities = 473/474 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgaatcgtagcttcagggctcaggaatcgcaaatgcaagctgcgttgaagcagagggag 60
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 620  atgaatcgtagcttcagggctcaagaatcgcaaatgcaagctgcgttgaagcagagggag 679

                                                                        
Query: 61   cagcagtttgggggtttgaggggttctgtcatgaaggagaaggatgaggagctcgcattg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680  cagcagtttgggggtttgaggggttctgtcatgaaggagaaggatgaggagctcgcattg 739

                                                                        
Query: 121  ttccttgagatgaagaagcgtgagaaggagcggaatgatcttcttcttctcaactcggat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740  ttccttgagatgaagaagcgtgagaaggagcggaatgatcttcttcttctcaactcggat 799

                                                                        
Query: 181  gagctcgattcacctttggggtcaaatcccagcacttcttccattttcaacattccagcg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800  gagctcgattcacctttggggtcaaatcccagcacttcttccattttcaacattccagcg 859

                                                                        
Query: 241  tctgcgccgattcctgttcggaagaatggtactgatgactttctcaattcagaaaatgat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860  tctgcgccgattcctgttcggaagaatggtactgatgactttctcaattcagaaaatgat 919

                                                                        
Query: 301  aaaaatgactatgactggcttctaactcctcctggtactcctctttttccttcgttggaa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920  aaaaatgactatgactggcttctaactcctcctggtactcctctttttccttcgttggaa 979

                                                                        
Query: 361  atggaaagtcggaagactgttatgagtcagcttggaagtggtaacccagcctcgcgccca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980  atggaaagtcggaagactgttatgagtcagcttggaagtggtaacccagcctcgcgccca 1039

                                                                  
Query: 421  gtagcattaaaatccagattgggaaatcatcaatcagagcctgctgggaggact 474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 gtagcattaaaatccagattgggaaatcatcaatcagagcctgctgggaggact 1093