Miyakogusa Predicted Gene
- Lj6g3v0519440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v0519440.1 tr|G7JBS8|G7JBS8_MEDTR Chaperone protein clpB
OS=Medicago truncatula GN=MTR_3g070850 PE=4 SV=1,70.65,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; coiled-coil,NULL;
seg,NULL; AAA_2,ATPase,,CUFF.57955.1
(3051 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV406876 464 e-129
gnl|LJGI|TC74691 weakly similar to UniRef100_A7Q3I3 Cluster: Chr... 442 e-123
gnl|LJGI|AV780935 similar to UniRef100_Q0IV93 Cluster: Os11g0104... 220 4e-56
gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone de... 117 4e-25
gnl|LJGI|TC72412 similar to UniRef100_A7NYE4 Cluster: Chromosome... 64 6e-09
>gnl|LJGI|AV406876
Length = 234
Score = 464 bits (234), Expect = e-129
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 692 ctgctatggcggaggagtgtgtggggcccggtgtggcggtgaattttggggacttaaagg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgctatggcggaggagtgtgtggggcccggtgtggcggtgaattttggggacttaaagg 60
Query: 752 gttttgtgggtggtgattctgatgggtgtggtggttctggggaagatgctgtgaggtttg 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttgtgggtggtgattctgatgggtgtggtggttctggggaagatgctgtgaggtttg 120
Query: 812 ttgttggggaattggctaagttgttgaaggttcactgtgacaggttttggttgctgggtg 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgttggggaattggctaagttgttgaaggttcactgtgacaggttttggttgctgggtg 180
Query: 872 ctgctgctagctatgaaagctacttgaaatttctgggtaggttcccttcaatag 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgctgctagctatgaaagctacttgaaatttctgggtaggttcccttcaatag 234
>gnl|LJGI|TC74691 weakly similar to UniRef100_A7Q3I3 Cluster: Chromosome chr13
scaffold_48, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 533
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 2829 cgagtttaacttagagatccagggagaagtcatggagcaattgcttgcagctgcatatct 2888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgagtttaacttagagatccagggagaagtcatggagcaattgcttgcagctgcatatct 60
Query: 2889 ctcagacagggatatggaggtggagaattgggtggagcaagttctctgtggaggattcac 2948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcagacagggatatggaggtggagaattgggtggagcaagttctctgtggaggattcac 120
Query: 2949 agaagcacagagaagatataacctcaatgctagttctattgtgaaacttgcttcatgtac 3008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaagcacagagaagatataacctcaatgctagttctattgtgaaacttgcttcatgtac 180
Query: 3009 agctccaagtgtgcaccttcctccaaggataattgtagaatga 3051
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agctccaagtgtgcaccttcctccaaggataattgtagaatga 223
>gnl|LJGI|AV780935 similar to UniRef100_Q0IV93 Cluster: Os11g0104300 protein; n=1;
Oryza sativa Japonica Group|Rep: Os11g0104300 protein -
Oryza, partial (2%)
Length = 158
Score = 220 bits (111), Expect = 4e-56
Identities = 145/151 (96%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 268 cagcacttgattct-gtcgatcctt-gatgacccggttgtcagccgggtcttcgcggaag 325
|||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 9 cagcacttgattctagtcgatcctttgat-acccggttgtcagccgggtcttcgcggaag 67
Query: 326 cgggtttcc-ggcgctccgagatcaagctcgccattctccgccctctgccgcatctcatg 384
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 cgggtttcctggagctccgagatcaagctcgccattctccgccctctgccgcatctcatg 127
Query: 385 aggccgcgcgggccgccggttttcctctgcg 415
|||||| ||||||||||||||||||||||||
Sbjct: 128 aggccgagcgggccgccggttttcctctgcg 158
>gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone deacetylase; n=2; Zea
mays|Rep: Histone deacetylase - Zea mays (Maize),
partial (27%)
Length = 927
Score = 117 bits (59), Expect = 4e-25
Identities = 89/98 (90%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 872 ctgctgctagctatgaaagctacttgaaatttctgggtaggttcccttcaatagag--aa 929
||||||| |||||||||||||||||| ||||| |||| |||||||||| |||||| ||
Sbjct: 800 ctgctgcaagctatgaaagctacttgtaatttttgggaaggttcccttttatagagagaa 859
Query: 930 agactgggacttgcagtttttgcctatcacctctgtta 967
|||||||||||||||||||||||| |||||||||||||
Sbjct: 860 agactgggacttgcagtttttgcccatcacctctgtta 897
>gnl|LJGI|TC72412 similar to UniRef100_A7NYE4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 487
Score = 63.9 bits (32), Expect = 6e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 121 ccggtgtccaactcgctcatggccgccatcaaacgctcgcaggctaaccagcgccg 176
|||||||| ||||| |||||||| |||||||||||||| |||| |||||||||||
Sbjct: 332 ccggtgtcgaactccctcatggctgccatcaaacgctcccagggaaaccagcgccg 387